RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 SLC10A4Q96EP9 437 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 GMCL1Q96IK5 515 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 WNK4Q96J92 1243 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 TMX3Q96JJ7 454 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 MYL10Q9BUA6 226 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
CDH3-210ENST00000569117 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
CDH3-210ENST00000569117 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 C19orf81C9J6K1 198 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 F5H6K3 240 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 PFKFB2O60825 505 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 RXRAP19793 462 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 GJA5P36382 358 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
CDH3-210ENST00000569117 KLRC3Q07444 240 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 PPP2R5BQ15173 497 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 ZYXQ15942 572 aaKnown RBP12.17□□□□□ -0.46
CDH3-210ENST00000569117 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
CDH3-210ENST00000569117 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
CDH3-210ENST00000569117 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
CDH3-210ENST00000569117 NAP1L2Q9ULW6 460 aaPredicted RBP12.17□□□□□ -0.46
CDH3-210ENST00000569117 CXCL11O14625 94 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
CDH3-210ENST00000569117 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
CDH3-210ENST00000569117 SLC10A3P09131 477 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 VCAM1P19320 739 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 KIF5BP33176 963 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 APLP1P51693 650 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 HMGCS2P54868 508 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 SCRN1Q12765 414 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 RTN1Q16799 776 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
CDH3-210ENST00000569117 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 RGMBQ6NW40 437 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 USP17L2Q6R6M4 530 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 FANCBQ8NB91 859 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 NUP133Q8WUM0 1156 aa12.16□□□□□ -0.46
CDH3-210ENST00000569117 SLKQ9H2G2 1235 aaPredicted RBP12.16□□□□□ -0.46
CDH3-210ENST00000569117 RBM28Q9NW13 759 aaKnown RBP12.16□□□□□ -0.46
CDH3-210ENST00000569117 ABT1Q9ULW3 272 aaKnown RBP12.16□□□□□ -0.46
CDH3-210ENST00000569117 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
CDH3-210ENST00000569117 EVI5O60447 810 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
CDH3-210ENST00000569117 BMP3P12645 472 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 CDC27P30260 824 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 SLC1A4P43007 532 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 ZNF157P51786 506 aaPredicted RBP12.15□□□□□ -0.46
CDH3-210ENST00000569117 STK3Q13188 491 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 SNAPC2Q13487 334 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 CUL4AQ13619 759 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 BECN1Q14457 450 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 MCM6Q14566 821 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 TMTC3Q6ZXV5 915 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 PROCA1Q8NCQ7 364 aaPredicted RBP12.15□□□□□ -0.46
CDH3-210ENST00000569117 NCOA5Q9HCD5 579 aaKnown RBP12.15□□□□□ -0.46
CDH3-210ENST00000569117 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
CDH3-210ENST00000569117 TMOD4Q9NZQ9 345 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 MAD2L2Q9UI95 211 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 MTMR7Q9Y216 660 aa12.15□□□□□ -0.46
CDH3-210ENST00000569117 FRMPD2Q68DX3 1309 aaPredicted RBP12.14□□□□□ -0.47
CDH3-210ENST00000569117 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 COL11A1P12107 1806 aaPredicted RBP12.14□□□□□ -0.47
CDH3-210ENST00000569117 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 RAD21O60216 631 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
CDH3-210ENST00000569117 GNAQP50148 359 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
CDH3-210ENST00000569117 DGKZQ13574 1117 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 CHMP4CQ96CF2 233 aa12.14□□□□□ -0.47
CDH3-210ENST00000569117 NUP88Q99567 741 aaPredicted RBP12.14□□□□□ -0.47
CDH3-210ENST00000569117 RBBP6Q7Z6E9 1792 aaKnown RBP12.13□□□□□ -0.47
CDH3-210ENST00000569117 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
CDH3-210ENST00000569117 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 PLA2G6O60733 806 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
CDH3-210ENST00000569117 STAT2P52630 851 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 GTF2A2P52657 109 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 MOGSQ13724 837 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 NTRK3Q16288 839 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 FAM83BQ5T0W9 1011 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 CPLX2Q6PUV4 134 aaKnown RBP12.13□□□□□ -0.47
CDH3-210ENST00000569117 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 CCDC83Q8IWF9 413 aa12.13□□□□□ -0.47
CDH3-210ENST00000569117 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms