RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 AKNAD1Q5T1N1 836 aa34.76■■■■□ 3.16
RAB40C-211ENST00000568586 LHX8Q68G74 356 aa34.76■■■■□ 3.16
RAB40C-211ENST00000568586 HTATIP2Q9BUP3 242 aa34.76■■■■□ 3.16
RAB40C-211ENST00000568586 DSCC1Q9BVC3 393 aa34.76■■■■□ 3.16
RAB40C-211ENST00000568586 FDX1P10109 184 aa34.75■■■■□ 3.15
RAB40C-211ENST00000568586 NT5C2P49902 561 aa34.75■■■■□ 3.15
RAB40C-211ENST00000568586 ZBED4O75132 1171 aa34.74■■■■□ 3.15
RAB40C-211ENST00000568586 OAZ1P54368 228 aa34.74■■■■□ 3.15
RAB40C-211ENST00000568586 HAND2P61296 217 aa34.74■■■■□ 3.15
RAB40C-211ENST00000568586 MFSD6Q6ZSS7 791 aa34.74■■■■□ 3.15
RAB40C-211ENST00000568586 DHX30Q7L2E3 1194 aaKnown RBP eCLIP34.74■■■■□ 3.157e-7■■■□□ 16.7
RAB40C-211ENST00000568586 TBC1D10CQ8IV04 446 aa34.74■■■■□ 3.15
RAB40C-211ENST00000568586 CYP2C19P33261 490 aa34.73■■■■□ 3.15
RAB40C-211ENST00000568586 KIFC2Q96AC6 838 aa34.73■■■■□ 3.15
RAB40C-211ENST00000568586 RNF41Q9H4P4 317 aaPredicted RBP34.73■■■■□ 3.15
RAB40C-211ENST00000568586 DIS3Q9Y2L1 958 aaKnown RBP34.73■■■■□ 3.15
RAB40C-211ENST00000568586 SLC1A4P43007 532 aa34.72■■■■□ 3.15
RAB40C-211ENST00000568586 RCSD1Q6JBY9 416 aa34.72■■■■□ 3.15
RAB40C-211ENST00000568586 FAM160B2Q86V87 743 aa34.72■■■■□ 3.15
RAB40C-211ENST00000568586 CHURC1Q8WUH1 139 aa34.72■■■■□ 3.15
RAB40C-211ENST00000568586 PAWRQ96IZ0 340 aaKnown RBP34.72■■■■□ 3.15
RAB40C-211ENST00000568586 MMP19Q99542 508 aa34.72■■■■□ 3.15
RAB40C-211ENST00000568586 RIPK3Q9Y572 518 aa34.72■■■■□ 3.15
RAB40C-211ENST00000568586 TMEM232C9JQI7 657 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 ZNF213O14771 459 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 MCCP23508 829 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 STAT2P52630 851 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 KCTD2Q14681 263 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 SNRNP48Q6IEG0 339 aaKnown RBP34.71■■■■□ 3.15
RAB40C-211ENST00000568586 NECAB2Q7Z6G3 386 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 MAML3Q96JK9 1138 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 TOMM22Q9NS69 142 aa34.71■■■■□ 3.15
RAB40C-211ENST00000568586 CYBAP13498 195 aa34.7■■■■□ 3.15
RAB40C-211ENST00000568586 ZNF792Q3KQV3 632 aa34.7■■■■□ 3.15
RAB40C-211ENST00000568586 RRP12Q5JTH9 1297 aaKnown RBP34.7■■■■□ 3.15
RAB40C-211ENST00000568586 TRPV1Q8NER1 839 aa34.7■■■■□ 3.15
RAB40C-211ENST00000568586 TTC14Q96N46 770 aa34.7■■■■□ 3.15
RAB40C-211ENST00000568586 IL25Q9H293 177 aa34.7■■■■□ 3.15
RAB40C-211ENST00000568586 ZNFX1Q9P2E3 1918 aaKnown RBP34.69■■■■□ 3.14
RAB40C-211ENST00000568586 TOP1P11387 765 aaKnown RBP34.69■■■■□ 3.14
RAB40C-211ENST00000568586 DIS3LQ8TF46 1054 aaKnown RBP34.69■■■■□ 3.14
RAB40C-211ENST00000568586 MSCO60682 206 aa34.68■■■■□ 3.14
RAB40C-211ENST00000568586 RAD50Q92878 1312 aa34.68■■■■□ 3.14
RAB40C-211ENST00000568586 TMEM47Q9BQJ4 181 aa34.68■■■■□ 3.14
RAB40C-211ENST00000568586 CTNNA3Q9UI47 895 aa34.68■■■■□ 3.14
RAB40C-211ENST00000568586 DCAF4Q8WV16 495 aa34.67■■■■□ 3.14
RAB40C-211ENST00000568586 ESR2Q92731 530 aa34.67■■■■□ 3.14
RAB40C-211ENST00000568586 DPF3Q92784 378 aa34.67■■■■□ 3.14
RAB40C-211ENST00000568586 RAVER2Q9HCJ3 691 aaKnown RBP34.67■■■■□ 3.14
RAB40C-211ENST00000568586 DDX20Q9UHI6 824 aaKnown RBP34.67■■■■□ 3.14
RAB40C-211ENST00000568586 DNAJC25-GNG10A0A024R161 153 aa34.66■■■■□ 3.14
RAB40C-211ENST00000568586 PGK2P07205 417 aa34.66■■■■□ 3.14
RAB40C-211ENST00000568586 CPXCR1Q8N123 301 aa34.66■■■■□ 3.14
RAB40C-211ENST00000568586 NRBP1Q9UHY1 535 aa34.66■■■■□ 3.14
RAB40C-211ENST00000568586 CTDP1Q9Y5B0 961 aaPredicted RBP34.66■■■■□ 3.14
RAB40C-211ENST00000568586 LAMA4Q16363 1823 aa34.66■■■■□ 3.14
RAB40C-211ENST00000568586 NEDD4P46934 1319 aa34.65■■■■□ 3.14
RAB40C-211ENST00000568586 H0YGN5 161 aa34.65■■■■□ 3.14
RAB40C-211ENST00000568586 CHMLP26374 656 aa34.65■■■■□ 3.14
RAB40C-211ENST00000568586 KCTD1Q719H9 257 aa34.65■■■■□ 3.14
RAB40C-211ENST00000568586 CHST13Q8NET6 341 aa34.65■■■■□ 3.14
RAB40C-211ENST00000568586 FBXO40Q9UH90 709 aa34.65■■■■□ 3.14
RAB40C-211ENST00000568586 ZNF536O15090 1300 aa34.64■■■■□ 3.14
RAB40C-211ENST00000568586 COL6A1P12109 1028 aa34.64■■■■□ 3.14
RAB40C-211ENST00000568586 BTNL9Q6UXG8 535 aa34.64■■■■□ 3.14
RAB40C-211ENST00000568586 IMMTQ16891 758 aaKnown RBP34.63■■■■□ 3.13
RAB40C-211ENST00000568586 TINF2Q9BSI4 451 aa34.63■■■■□ 3.13
RAB40C-211ENST00000568586 SEPT4O43236 478 aa34.62■■■■□ 3.13
RAB40C-211ENST00000568586 RASGRP2Q7LDG7 609 aa34.62■■■■□ 3.13
RAB40C-211ENST00000568586 DGKHQ86XP1 1220 aa34.62■■■■□ 3.13
RAB40C-211ENST00000568586 MSL3Q8N5Y2 521 aaKnown RBP34.62■■■■□ 3.13
RAB40C-211ENST00000568586 RUFY2Q8WXA3 655 aa34.62■■■■□ 3.13
RAB40C-211ENST00000568586 C11orf49Q9H6J7 331 aa34.62■■■■□ 3.13
RAB40C-211ENST00000568586 PRR12Q9ULL5 1215 aa34.62■■■■□ 3.13
RAB40C-211ENST00000568586 SNHG28P0DPA3 235 aa34.61■■■■□ 3.13
RAB40C-211ENST00000568586 ANKS1AQ92625 1134 aa34.61■■■■□ 3.13
RAB40C-211ENST00000568586 NR2E3Q9Y5X4 410 aa34.61■■■■□ 3.13
RAB40C-211ENST00000568586 CNGA1P29973 690 aa34.6■■■■□ 3.13
RAB40C-211ENST00000568586 CCDC178Q5BJE1 867 aa34.6■■■■□ 3.13
RAB40C-211ENST00000568586 IKQ13123 557 aaPredicted RBP34.59■■■■□ 3.13
RAB40C-211ENST00000568586 TKFCQ3LXA3 575 aa34.59■■■■□ 3.13
RAB40C-211ENST00000568586 MAMDC4Q6UXC1 1216 aa34.59■■■■□ 3.13
RAB40C-211ENST00000568586 ZNF467Q7Z7K2 595 aaPredicted RBP34.59■■■■□ 3.13
RAB40C-211ENST00000568586 DDX11Q96FC9 970 aa34.59■■■■□ 3.13
RAB40C-211ENST00000568586 ISY1Q9ULR0 285 aaKnown RBP34.59■■■■□ 3.13
RAB40C-211ENST00000568586 PFASO15067 1338 aa34.58■■■■□ 3.13
RAB40C-211ENST00000568586 FRMPD3Q5JV73 1810 aa34.58■■■■□ 3.13
RAB40C-211ENST00000568586 PDHBP11177 359 aa34.58■■■■□ 3.13
RAB40C-211ENST00000568586 PRAMEF19Q5SWL8 479 aa34.58■■■■□ 3.13
RAB40C-211ENST00000568586 CHMP4CQ96CF2 233 aa34.58■■■■□ 3.13
RAB40C-211ENST00000568586 PLXNA1Q9UIW2 1896 aa34.58■■■■□ 3.13
RAB40C-211ENST00000568586 EVI5O60447 810 aa34.57■■■■□ 3.12
RAB40C-211ENST00000568586 KDM4AO75164 1064 aa34.57■■■■□ 3.12
RAB40C-211ENST00000568586 IQCA1Q86XH1 822 aa34.57■■■■□ 3.12
RAB40C-211ENST00000568586 AGBL1Q96MI9 1066 aa34.57■■■■□ 3.12
RAB40C-211ENST00000568586 RANBP2P49792 3224 aaKnown RBP34.57■■■■□ 3.12
RAB40C-211ENST00000568586 SGSM2O43147 1006 aa34.56■■■■□ 3.12
RAB40C-211ENST00000568586 CCDC96Q2M329 555 aa34.56■■■■□ 3.12
RAB40C-211ENST00000568586 TTBK2Q6IQ55 1244 aa34.56■■■■□ 3.12
RAB40C-211ENST00000568586 KRT23Q9C075 422 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms