RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 USP5P45974 858 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 TAP1Q03518 808 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 TFCP2Q12800 502 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 SEPT2Q15019 361 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.53
KARS-209ENST00000568378 ACTN1P12814 892 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 IL9P15248 144 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 KCNA5P22460 613 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 ARID4AP29374 1257 aaPredicted RBP11.7□□□□□ -0.54
KARS-209ENST00000568378 MCAMP43121 646 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 TTLL4Q14679 1199 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 LEXMQ3ZCV2 418 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 PTCRAQ6ISU1 281 aaPredicted RBP11.7□□□□□ -0.54
KARS-209ENST00000568378 ADGRA1Q86SQ6 560 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 TTC6Q86TZ1 520 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
KARS-209ENST00000568378 SCLYQ96I15 445 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 SLC9A7Q96T83 725 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 NOC4LQ9BVI4 516 aaKnown RBP11.7□□□□□ -0.54
KARS-209ENST00000568378 WNT8AQ9H1J5 351 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 EHD4Q9H223 541 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 COPRSQ9NQ92 184 aa11.7□□□□□ -0.54
KARS-209ENST00000568378 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
KARS-209ENST00000568378 MYH1P12882 1939 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 A0A1W2PRG0 241 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 SNAI1O95863 264 aaPredicted RBP11.69□□□□□ -0.54
KARS-209ENST00000568378 PFKMP08237 780 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 GJA9P57773 515 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 DYNLL1P63167 89 aaKnown RBP11.69□□□□□ -0.54
KARS-209ENST00000568378 HFE2Q6ZVN8 426 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 DEFB128Q7Z7B8 93 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 RIOX2Q8IUF8 465 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 SPICE1Q8N0Z3 855 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
KARS-209ENST00000568378 UPF3AQ9H1J1 476 aaKnown RBP11.69□□□□□ -0.54
KARS-209ENST00000568378 GFRA3O60609 400 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 LPXNO60711 386 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 ARHGEF15O94989 841 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 SHMT1P34896 483 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 COPB2P35606 906 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 STAT3P40763 770 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 PTPN5P54829 565 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 ITGA7Q13683 1181 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 ACVR2BQ13705 512 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 CXCL17Q6UXB2 119 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
KARS-209ENST00000568378 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.68□□□□□ -0.54
KARS-209ENST00000568378 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 GDPD5Q8WTR4 605 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 TRPV6Q9H1D0 765 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 LMCD1Q9NZU5 365 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 HDAC5Q9UQL6 1122 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 ZDBF2Q9HCK1 2354 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 BRWD1Q9NSI6 2320 aa11.68□□□□□ -0.54
KARS-209ENST00000568378 POTEB3A0JP26 581 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 ADCY6O43306 1168 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 B4GALT4O60513 344 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 CABYRO75952 493 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 BEX3Q00994 111 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
KARS-209ENST00000568378 CCDC144BQ3MJ40 725 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 KIAA1755Q5JYT7 1200 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 POTEBQ6S5H4 581 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 NOL8Q76FK4 1167 aaKnown RBP11.67□□□□□ -0.54
KARS-209ENST00000568378 HERC6Q8IVU3 1022 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 SLC43A3Q8NBI5 491 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 DDX11Q96FC9 970 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
KARS-209ENST00000568378 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
KARS-209ENST00000568378 ZNF318Q5VUA4 2279 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
KARS-209ENST00000568378 GRXCR2A6NFK2 248 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
KARS-209ENST00000568378 CYP7A1P22680 504 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 MAMDC4Q6UXC1 1216 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 MIGA1Q8NAN2 632 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 SEZ6LQ9BYH1 1024 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 ABHD16BQ9H3Z7 469 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
KARS-209ENST00000568378 ZEB2O60315 1214 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 POLR3DP05423 398 aaPredicted RBP11.65□□□□□ -0.54
KARS-209ENST00000568378 PLCD1P51178 756 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 TTC39AQ5SRH9 613 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 SPRED2Q7Z698 418 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 CERS3Q8IU89 383 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 AGBL1Q96MI9 1066 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
KARS-209ENST00000568378 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
KARS-209ENST00000568378 VCPKMTQ9H867 229 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 MTUS1Q9ULD2 1270 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 CFAP54Q96N23 3096 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 USP34Q70CQ2 3546 aa11.65□□□□□ -0.54
KARS-209ENST00000568378 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms