RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 PPM1EQ8WY54 764 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
SNX29-206ENST00000568359 CRNKL1Q9BZJ0 848 aaKnown RBP6.49□□□□□ -1.37
SNX29-206ENST00000568359 TTYH1Q9H313 450 aaPredicted RBP6.49□□□□□ -1.37
SNX29-206ENST00000568359 MROH8Q9H579 483 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 GPR108Q9NPR9 543 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 TMEM39AQ9NV64 488 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 HOXC10Q9NYD6 342 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 CNPY2Q9Y2B0 182 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 TACC3Q9Y6A5 838 aa6.49□□□□□ -1.37
SNX29-206ENST00000568359 MAGEB6P1A0A0J9YX57 407 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 A0A1W2PQ45 241 aaPredicted RBP6.48□□□□□ -1.37
SNX29-206ENST00000568359 A0A1W2PQY0 241 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 TRIM43BA6NCK2 446 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 DCDC2CA8MYV0 355 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 TNFRSF10AO00220 468 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 TRIM27P14373 513 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 DNAJB2P25686 324 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 SHMT1P34896 483 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 ABL2P42684 1182 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 TLE2Q04725 743 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 ICA1Q05084 483 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 KCTD2Q14681 263 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 SNX17Q15036 470 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 PRAMEF19Q5SWL8 479 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 C1orf53Q5VUE5 145 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 TMED8Q6PL24 325 aaPredicted RBP6.48□□□□□ -1.37
SNX29-206ENST00000568359 TMEM179Q6ZVK1 233 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 SH3RF1Q7Z6J0 888 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 ABRAQ8N0Z2 381 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 SPICE1Q8N0Z3 855 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 NUP133Q8WUM0 1156 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 TRIM43Q96BQ3 446 aaPredicted RBP6.48□□□□□ -1.37
SNX29-206ENST00000568359 TIFAQ96CG3 184 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 MAML3Q96JK9 1138 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 ZNF512BQ96KM6 892 aaPredicted RBP6.48□□□□□ -1.37
SNX29-206ENST00000568359 MMP19Q99542 508 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 MCM9Q9NXL9 1143 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 VCANP13611 3396 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 CDH23Q9H251 3354 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 BAZ2AQ9UIF9 1905 aaKnown RBP6.48□□□□□ -1.37
SNX29-206ENST00000568359 MROH7Q68CQ1 1323 aa6.48□□□□□ -1.37
SNX29-206ENST00000568359 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 COBLO75128 1261 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 BCAR3O75815 825 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 SLC25A27O95847 323 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 PGK1P00558 417 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 AKR1A1P14550 325 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 NCLP19338 710 aaKnown RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 COL9A1P20849 921 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 PLCD1P51178 756 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 TTF1Q15361 905 aaPredicted RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 MYSM1Q5VVJ2 828 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 AACSQ86V21 672 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 ERC1Q8IUD2 1116 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 ITPRIPQ8IWB1 547 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 VTI1AQ96AJ9 217 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 ATG4CQ96DT6 458 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 CCDC8Q9H0W5 538 aaPredicted RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 ZNF576Q9H609 170 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 STARD7Q9NQZ5 370 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 TLR7Q9NYK1 1049 aaKnown RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 SWAP70Q9UH65 585 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 NRBP1Q9UHY1 535 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 DBNLQ9UJU6 430 aaKnown RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 PHF24Q9UPV7 400 aa6.47□□□□□ -1.37
SNX29-206ENST00000568359 CTDP1Q9Y5B0 961 aaPredicted RBP6.47□□□□□ -1.37
SNX29-206ENST00000568359 MYH7P12883 1935 aa6.46□□□□□ -1.37
SNX29-206ENST00000568359 PRUNE2Q8WUY3 3088 aa6.46□□□□□ -1.37
SNX29-206ENST00000568359 ROBO3Q96MS0 1386 aa6.46□□□□□ -1.37
SNX29-206ENST00000568359 A0A1W2PRG0 241 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 ANKRD62A6NC57 917 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 GRXCR2A6NFK2 248 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 SMCHD1A6NHR9 2005 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 KIAA0355O15063 1070 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 WDR46O15213 610 aaKnown RBP6.46□□□□□ -1.38
SNX29-206ENST00000568359 PGK2P07205 417 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 IGFBP4P22692 258 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 COPB2P35606 906 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 PPIGQ13427 754 aaKnown RBP eCLIP6.46□□□□□ -1.383e-6■■■■□ 24.1
SNX29-206ENST00000568359 GRIN2CQ14957 1233 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 SLC9C2Q5TAH2 1124 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 ZKSCAN2Q63HK3 967 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 TICAM2Q86XR7 235 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 TRMT2AQ8IZ69 625 aaKnown RBP6.46□□□□□ -1.38
SNX29-206ENST00000568359 TMEM57Q8N5G2 664 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 SLC44A5Q8NCS7 719 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 SSH3Q8TE77 659 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 SDR42E1Q8WUS8 393 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 GBF1Q92538 1859 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 LENG1Q96BZ8 264 aaPredicted RBP6.46□□□□□ -1.38
SNX29-206ENST00000568359 GLT1D1Q96MS3 346 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 DNAJC2Q99543 621 aaKnown RBP6.46□□□□□ -1.38
SNX29-206ENST00000568359 TINF2Q9BSI4 451 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 TSPYL2Q9H2G4 693 aaPredicted RBP6.46□□□□□ -1.38
SNX29-206ENST00000568359 MTIF3Q9H2K0 278 aaKnown RBP6.46□□□□□ -1.38
SNX29-206ENST00000568359 ANTXR1Q9H6X2 564 aa6.46□□□□□ -1.38
SNX29-206ENST00000568359 VCPKMTQ9H867 229 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms