RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 NUP88Q99567 741 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 TMEM47Q9BQJ4 181 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 DIS3Q9Y2L1 958 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-205ENST00000568129 ZNF536O15090 1300 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 NEDD4P46934 1319 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 DNAJC25-GNG10A0A024R161 153 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 COBLO75128 1261 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 ADORA2AP29274 412 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 PTH1RQ03431 593 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 CACNB2Q08289 660 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 TRIM32Q13049 653 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 IMMTQ16891 758 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 CCDC178Q5BJE1 867 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 ERICH6BQ5W0A0 696 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 LRRC47Q8N1G4 583 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 U2AF1L4Q8WU68 220 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 ESR2Q92731 530 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 TEX13BQ9BXU2 312 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 HMX1Q9NP08 348 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 FLRT1Q9NZU1 646 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 ZSWIM5Q9P217 1185 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 OGDHLQ9ULD0 1010 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 IVNS1ABPQ9Y6Y0 642 aa9.66□□□□□ -0.86
HDGFL3-205ENST00000568129 TMEM232C9JQI7 657 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 CYP21A2P08686 494 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 PDHBP11177 359 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 FCER1AP12319 257 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 MCCP23508 829 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 SLC1A4P43007 532 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 MNX1P50219 401 aaPredicted RBP9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 STAT2P52630 851 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 CCL14Q16627 93 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 ZNF792Q3KQV3 632 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 LHX8Q68G74 356 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 CCAR1Q8IX12 1150 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 ANKLE1Q8NAG6 615 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 KRT23Q9C075 422 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 CNNM2Q9H8M5 875 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 NRBP1Q9UHY1 535 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 STX8Q9UNK0 236 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 RIPK3Q9Y572 518 aa9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 BAZ2BQ9UIF8 2168 aaKnown RBP9.65□□□□□ -0.86
HDGFL3-205ENST00000568129 ZBED4O75132 1171 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 ZKSCAN1P17029 563 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 PLS1Q14651 629 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 SEC23AQ15436 765 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 TKFCQ3LXA3 575 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 NCAPG2Q86XI2 1143 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 CHST13Q8NET6 341 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 MAML3Q96JK9 1138 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 MAF1Q9H063 256 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 LSG1Q9H089 658 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 RANBP17Q9H2T7 1088 aaKnown RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 SLC5A4Q9NY91 659 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 PRR12Q9ULL5 1215 aa9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 U3KPZ7 1027 aaPredicted RBP9.64□□□□□ -0.87
HDGFL3-205ENST00000568129 B4E1Z4 1266 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 KDM4AO75164 1064 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 CYBAP13498 195 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 ZNF543Q08ER8 600 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 NECTIN1Q15223 517 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 RRP12Q5JTH9 1297 aaKnown RBP9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 MFSD14CQ5VZR4 134 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 KCTD1Q719H9 257 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 DPP9Q86TI2 863 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 IQCA1Q86XH1 822 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 ENAHQ8N8S7 591 aaPredicted RBP9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 KIFC2Q96AC6 838 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 DEFB118Q96PH6 123 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 ZSCAN10Q96SZ4 725 aaPredicted RBP9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 MMP19Q99542 508 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 MTA3Q9BTC8 594 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 FBXO40Q9UH90 709 aa9.63□□□□□ -0.87
HDGFL3-205ENST00000568129 MSCO60682 206 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 MYCP01106 439 aaPredicted RBP9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 TFRCP02786 760 aaKnown RBP9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 CCND3P30281 292 aaPredicted RBP9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 KCTD2Q14681 263 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 TSGA10IPQ3SY00 556 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 GPATCH4Q5T3I0 446 aaKnown RBP9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 SNRNP48Q6IEG0 339 aaKnown RBP9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 FAM133AQ8N9E0 248 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 FGD4Q96M96 766 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 RAVER2Q9HCJ3 691 aaKnown RBP9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 TOMM22Q9NS69 142 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
HDGFL3-205ENST00000568129 SYNGAP1Q96PV0 1343 aa9.61□□□□□ -0.87
HDGFL3-205ENST00000568129 DNAH12Q6ZR08 3092 aa9.61□□□□□ -0.87
HDGFL3-205ENST00000568129 KIAA1217Q5T5P2 1943 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms