RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 ATP6V1DQ9Y5K8 247 aa12.06□□□□□ -0.48
TCF4-236ENST00000567880 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 USP2O75604 605 aaPredicted RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 XBP1P17861 261 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 IRF5Q13568 498 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 TTLL12Q14166 644 aaPredicted RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 PFKFB3Q16875 520 aaPredicted RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 FAM177A1Q8N128 213 aaPredicted RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 GPKOWQ92917 476 aaPredicted RBP eCLIP12.05□□□□□ -0.48
TCF4-236ENST00000567880 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 SH2D4AQ9H788 454 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 SMCHD1A6NHR9 2005 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 PAPPA2Q9BXP8 1791 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 BMP3P12645 472 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 MCM4P33991 863 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 RESTQ13127 1097 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
TCF4-236ENST00000567880 KIAA1755Q5JYT7 1200 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.05□□□□□ -0.48
TCF4-236ENST00000567880 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 PIGSQ96S52 555 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 NMRK2Q9NPI5 230 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 GINM1Q9NU53 330 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 SYNPO2Q9UMS6 1093 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 PTPRFP10586 1907 aa12.05□□□□□ -0.48
TCF4-236ENST00000567880 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 PTPRAP18433 802 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 DNM1Q05193 864 aaKnown RBP12.04□□□□□ -0.48
TCF4-236ENST00000567880 FAM83BQ5T0W9 1011 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 MOB2Q70IA6 237 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 ADGRF4Q8IZF3 695 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 SHISA4Q96DD7 197 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 ZSCAN16Q9H4T2 348 aaPredicted RBP12.04□□□□□ -0.48
TCF4-236ENST00000567880 RIOX1Q9H6W3 641 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 VCPKMTQ9H867 229 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
TCF4-236ENST00000567880 KIF28PB7ZC32 967 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 GOLGA6L22H0YM25 854 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 MMP1P03956 469 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 KIF23Q02241 960 aaPredicted RBP12.03□□□□□ -0.48
TCF4-236ENST00000567880 SPP2Q13103 211 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 DGKZQ13574 1117 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 MTMR2Q13614 643 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 VGLL4Q14135 290 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 SAFBQ15424 915 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCF4-236ENST00000567880 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 TRIM75PA6NK02 468 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 TRAF5O00463 557 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
TCF4-236ENST00000567880 NLRP5P59047 1200 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
TCF4-236ENST00000567880 WWC2Q6AWC2 1192 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 DIS3L2Q8IYB7 885 aaKnown RBP12.03□□□□□ -0.48
TCF4-236ENST00000567880 RETREG2Q8NC44 543 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 PHF20Q9BVI0 1012 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 CSADQ9Y600 493 aa12.03□□□□□ -0.48
TCF4-236ENST00000567880 PARP14Q460N5 1801 aa12.02□□□□□ -0.48
TCF4-236ENST00000567880 BTBD18B2RXH4 712 aa12.02□□□□□ -0.49
TCF4-236ENST00000567880 FIBPO43427 364 aa12.02□□□□□ -0.49
TCF4-236ENST00000567880 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
TCF4-236ENST00000567880 NOL9Q5SY16 702 aaKnown RBP12.02□□□□□ -0.49
TCF4-236ENST00000567880 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.49
TCF4-236ENST00000567880 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.49
TCF4-236ENST00000567880 TFIP11Q9UBB9 837 aaKnown RBP12.02□□□□□ -0.49
TCF4-236ENST00000567880 A6NJR5 290 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 DDX11L8A8MPP1 907 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 STAT2P52630 851 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 NAPAP54920 295 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 SNAP25P60880 206 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 KIAA1683Q9H0B3 1180 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 SNCAIPQ9Y6H5 919 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 PNMA6FA0A0J9YX94 578 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 STXBP3O00186 592 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
TCF4-236ENST00000567880 KRT2P35908 639 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 KRT85P78386 507 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 CEBPZQ03701 1054 aaKnown RBP12.01□□□□□ -0.49
TCF4-236ENST00000567880 NR5A1Q13285 461 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 CDC37Q16543 378 aaPredicted RBP12.01□□□□□ -0.49
TCF4-236ENST00000567880 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 BRAPQ7Z569 592 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 LDHDQ86WU2 507 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 COA7Q96BR5 231 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
TCF4-236ENST00000567880 BRMS1Q9HCU9 246 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms