RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 GOLGA8FQ08AF8 430 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 GOLGA8DPQ0D2H9 430 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 SBK1Q52WX2 424 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 EARS2Q5JPH6 523 aaKnown RBP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-213ENST00000566756 SUGT1Q9Y2Z0 365 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 MRFAP1Q9Y605 127 aa18.99■□□□□ 0.63
CMTM3-213ENST00000566756 CDK5RAP2Q96SN8 1893 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 PPP1R3GB7ZBB8 358 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 BAG3O95817 575 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 GNG11P61952 73 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 TUBB2AQ13885 445 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 TERF2Q15554 542 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 GPR161Q8N6U8 529 aaKnown RBP18.98■□□□□ 0.63
CMTM3-213ENST00000566756 IQUBQ8NA54 791 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 CTCFLQ8NI51 663 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-213ENST00000566756 KIFC2Q96AC6 838 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 EYA3Q99504 573 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 TUBB2BQ9BVA1 445 aa18.98■□□□□ 0.63
CMTM3-213ENST00000566756 DCP1AQ9NPI6 582 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-213ENST00000566756 FAM205CA6NFA0 338 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 E2F4Q16254 413 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 ARL6IP4Q66PJ3 421 aaKnown RBP18.97■□□□□ 0.63
CMTM3-213ENST00000566756 TMCO3Q6UWJ1 677 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 PPFIBP1Q86W92 1011 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 SLF2Q8IX21 1173 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 CARD6Q9BX69 1037 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 FHOD1Q9Y613 1164 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 LRRC10BA6NIK2 292 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 CD44P16070 742 aaKnown RBP18.97■□□□□ 0.63
CMTM3-213ENST00000566756 SPAG1Q07617 926 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 SEMA3FQ13275 785 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 GRIK5Q16478 980 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 MFSD14BQ5SR56 506 aa18.97■□□□□ 0.63
CMTM3-213ENST00000566756 ARPP21Q9UBL0 812 aaPredicted RBP18.97■□□□□ 0.63
CMTM3-213ENST00000566756 SCG2P13521 617 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 TUBB4BP68371 445 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 HSP90AA4PQ58FG1 418 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 CNGA4Q8IV77 575 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 IGSF22Q8N9C0 903 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 SH3GLB2Q9NR46 395 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 MKRN1Q9UHC7 482 aaKnown RBP18.96■□□□□ 0.63
CMTM3-213ENST00000566756 C10orf71Q711Q0 1435 aa18.96■□□□□ 0.63
CMTM3-213ENST00000566756 USP17L12C9JPN9 530 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 USP17L21D6R901 530 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 GTPBP6O43824 516 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 PRDM1O75626 825 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 CALML3P27482 149 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 AFMP43652 599 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 PTGDRQ13258 359 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 PFKFB3Q16875 520 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 CC2D2BQ6DHV5 1058 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 RSRC2Q7L4I2 434 aaKnown RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 WDR24Q96S15 920 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 RTFDC1Q9BY42 306 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 RMND1Q9NWS8 449 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 LIMA1Q9UHB6 759 aaKnown RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 GPR75-ASB3A0A0A6YYF3 556 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 MFAP3LO75121 409 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 PNMA6AP0CW24 399 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 KIF5BP33176 963 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 TRIM14Q14142 442 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 JAKMIP3Q5VZ66 844 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 FAM177A1Q8N128 213 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 SRBD1Q8N5C6 995 aaKnown RBP18.95■□□□□ 0.62
CMTM3-213ENST00000566756 RABGGTAQ92696 567 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 RWDD2AQ9UIY3 292 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 ADGRG1Q9Y653 693 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 KIF13BQ9NQT8 1826 aa18.95■□□□□ 0.62
CMTM3-213ENST00000566756 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 RIMBP2O15034 1052 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 TEX33O43247 280 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 PPP2R3AQ06190 1150 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 DIXDC1Q155Q3 683 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 ZNF174Q15697 407 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 PTPN21Q16825 1174 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 PDXDC2PQ6P474 469 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 RASGRP2Q7LDG7 609 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 C7orf43Q8WVR3 580 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 GAKO14976 1311 aa18.94■□□□□ 0.62
CMTM3-213ENST00000566756 CYP2D7A0A087X1C5 515 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 CHRNA5P30532 468 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 LONP1P36776 959 aaKnown RBP18.93■□□□□ 0.62
CMTM3-213ENST00000566756 GTF2IP78347 998 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 RBL2Q08999 1139 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 PODNQ7Z5L7 613 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 SMIM22K7EJ46 135 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 WNT7AO00755 349 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 PLCG2P16885 1265 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 NLRP5P59047 1200 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 TAF3Q5VWG9 929 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 ZNF771Q7L3S4 317 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-213ENST00000566756 ANKS1AQ92625 1134 aa18.93■□□□□ 0.62
CMTM3-213ENST00000566756 PDGFDQ9GZP0 370 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-213ENST00000566756 ZHX1Q9UKY1 873 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-213ENST00000566756 GRIPAP1Q4V328 841 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms