RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 NR5A1Q13285 461 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 ARID5BQ14865 1188 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 MICALL2Q8IY33 904 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 OXER1Q8TDS5 423 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 ANKS1AQ92625 1134 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 UBA5Q9GZZ9 404 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 RBM28Q9NW13 759 aaKnown RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 MYH1P12882 1939 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 SMTNL1A8MU46 457 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 IKBKBO14920 756 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 CYTH3O43739 400 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 PTPREP23469 700 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 PNOCQ13519 176 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 TNIP1Q15025 636 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 KRBA2Q6ZNG9 492 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 ELOA2Q8IYF1 753 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 SWAP70Q9UH65 585 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 FBXO2Q9UK22 296 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
PDXDC1-214ENST00000566633 FZD9O00144 591 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 ADAMTS3O15072 1205 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 FILIP1Q7Z7B0 1213 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 FOXP4Q8IVH2 680 aaPredicted RBP12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 PCDHB6Q9Y5E3 794 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 ATP2B1P20020 1258 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 SEPT2Q15019 361 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 HOMER1Q86YM7 354 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 FAM13BQ9NYF5 915 aa12.34□□□□□ -0.43
PDXDC1-214ENST00000566633 KLRF2D3W0D1 207 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 ENTPD3O75355 529 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 TOP1P11387 765 aaKnown RBP12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 KIF5BP33176 963 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 GRIN1Q05586 938 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 SPECC1Q5M775 1068 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 EHD4Q9H223 541 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 HSD3B7Q9H2F3 369 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 CABP5Q9NP86 173 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 IMPACTQ9P2X3 320 aa12.33□□□□□ -0.43
PDXDC1-214ENST00000566633 CNTNAP1P78357 1384 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 IGKV6D-41A0A0C4DH26 115 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 GH2P01242 217 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 XBP1P17861 261 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 TPM4P67936 248 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 GRM4Q14833 912 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 NOM1Q5C9Z4 860 aaKnown RBP12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 PRAMEF18Q5VWM3 479 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 GPCPD1Q9NPB8 672 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 IFNKQ9P0W0 207 aa12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
PDXDC1-214ENST00000566633 FAM205CA6NFA0 338 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 MYO1BO43795 1136 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 TTLL1O95922 423 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 SKILP12757 684 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 EEF2P13639 858 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 CCZ1BP86790 482 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 CCZ1P86791 482 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 CCDC178Q5BJE1 867 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 FAM151AQ8WW52 585 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 PDCL3Q9H2J4 239 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 CEP131Q9UPN4 1083 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 BRCA1P38398 1863 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 PARP1P09874 1014 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 PDHBP11177 359 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 GSDMDP57764 484 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 TTBK2Q6IQ55 1244 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 TATDN1Q6P1N9 297 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 KCTD1Q719H9 257 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 SIAH1Q8IUQ4 282 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 FER1L6Q2WGJ9 1857 aa12.32□□□□□ -0.44
PDXDC1-214ENST00000566633 FOXN1O15353 648 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 SMC2O95347 1197 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 SLC16A2P36021 539 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 RASA3Q14644 834 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 ABCB5Q2M3G0 1257 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms