RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 UBA7P41226 1012 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 STAT6P42226 847 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 AFMP43652 599 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 SPAG1Q07617 926 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 PICALMQ13492 652 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 STIM1Q13586 685 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 EARS2Q5JPH6 523 aaKnown RBP15.15■□□□□ 0.02
LINC00563-201ENST00000566370 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 STYK1Q6J9G0 422 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 USP40Q9NVE5 1235 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 FANCLQ9NW38 375 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 SERPINB13Q9UIV8 391 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 PCDHA6Q9UN73 950 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 PCDHA8Q9Y5H6 950 aa15.15■□□□□ 0.02
LINC00563-201ENST00000566370 H0YIN7 160 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 FOXN1O15353 648 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 TTLL1O95922 423 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 MMP10P09238 476 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 TPM1P09493 284 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 PPP1R2P41236 205 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 CCZ1BP86790 482 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 CCZ1P86791 482 aaPredicted RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 HDLBPQ00341 1268 aaKnown RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 DPYDQ12882 1025 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 FCHSD1Q86WN1 690 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 COL23A1Q86Y22 540 aaPredicted RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 FOXP4Q8IVH2 680 aaPredicted RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 CEP95Q96GE4 821 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 C16orf45Q96MC5 204 aaPredicted RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 NAP1L4Q99733 375 aaKnown RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 MRIQ9BWK5 157 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 GLT8D2Q9H1C3 349 aa15.14■□□□□ 0.01
LINC00563-201ENST00000566370 DHX36Q9H2U1 1008 aaKnown RBP15.14■□□□□ 0.01
LINC00563-201ENST00000566370 SMCO2A6NFE2 343 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 NOVP48745 357 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 GPATCH4Q5T3I0 446 aaKnown RBP15.13■□□□□ 0.01
LINC00563-201ENST00000566370 RRAGBQ5VZM2 374 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 CEP135Q66GS9 1140 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 REXO1Q8N1G1 1221 aaKnown RBP15.13■□□□□ 0.01
LINC00563-201ENST00000566370 SUPT20HQ8NEM7 779 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00563-201ENST00000566370 RAB34Q9BZG1 259 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 EHD4Q9H223 541 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
LINC00563-201ENST00000566370 GOLGA6L9A6NEM1 432 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
LINC00563-201ENST00000566370 ZSCAN12O43309 604 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 OR52Z1P0C646 297 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 ATP1A3P13637 1013 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 HOXA7P31268 230 aaPredicted RBP15.12■□□□□ 0.01
LINC00563-201ENST00000566370 AMPD3Q01432 767 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 HSP90AA2PQ14568 343 aaPredicted RBP15.12■□□□□ 0.01
LINC00563-201ENST00000566370 ZNF827Q17R98 1081 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 TMEM266Q2M3C6 531 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 USP49Q70CQ1 688 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 NEK8Q86SG6 692 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 CCAR2Q8N163 923 aaKnown RBP15.12■□□□□ 0.01
LINC00563-201ENST00000566370 PROM2Q8N271 834 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 CNKSR1Q969H4 720 aa15.12■□□□□ 0.01
LINC00563-201ENST00000566370 M0R2N6 131 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 ADCY7P51828 1080 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 INF2Q27J81 1249 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 SPECC1LQ69YQ0 1117 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 GRAMD1CQ8IYS0 662 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 KIF18AQ8NI77 898 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 CCSER1Q9C0I3 900 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 RIOX1Q9H6W3 641 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
LINC00563-201ENST00000566370 DISC1Q9NRI5 854 aa15.11■□□□□ 0.01
LINC00563-201ENST00000566370 COL11A2P13942 1736 aaPredicted RBP15.1■□□□□ 0.01
LINC00563-201ENST00000566370 CYTH3O43739 400 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 ZNF18P17022 549 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 GABPAQ06546 454 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 E2F4Q16254 413 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
LINC00563-201ENST00000566370 STRIP1Q5VSL9 837 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 MCTP2Q6DN12 878 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 PPFIBP1Q86W92 1011 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 CALML4Q96GE6 196 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 LRRC27Q9C0I9 530 aa15.1■□□□□ 0.01
LINC00563-201ENST00000566370 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 ARHGAP6O43182 974 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 CCNT1O60563 726 aaKnown RBP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 PDHBP11177 359 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 BMP6P22004 513 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 CRKP46108 304 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 PAK1Q13153 545 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 SYCP1Q15431 976 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 PDXDC2PQ6P474 469 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 ZDHHC15Q96MV8 337 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 PIGSQ96S52 555 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms