RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SNRNP48Q6IEG0 339 aaKnown RBP21.78■■□□□ 1.08
USB1-213ENST00000566292 INCENPQ9NQS7 918 aa21.78■■□□□ 1.08
USB1-213ENST00000566292 DIS3Q9Y2L1 958 aaKnown RBP21.78■■□□□ 1.08
USB1-213ENST00000566292 ATP2A1O14983 1001 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 AAMPQ13685 434 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 SLFN13Q68D06 897 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 KIFC2Q96AC6 838 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 TINF2Q9BSI4 451 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 LNPKQ9C0E8 428 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 FEM1BQ9UK73 627 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 MCM3APO60318 1980 aa21.77■■□□□ 1.08
USB1-213ENST00000566292 SOX1O00570 391 aaPredicted RBP21.76■■□□□ 1.07
USB1-213ENST00000566292 ATN1P54259 1190 aaPredicted RBP21.76■■□□□ 1.07
USB1-213ENST00000566292 SMC5Q8IY18 1101 aa21.76■■□□□ 1.07
USB1-213ENST00000566292 CPXCR1Q8N123 301 aa21.76■■□□□ 1.07
USB1-213ENST00000566292 ARRDC4Q8NCT1 418 aa21.76■■□□□ 1.07
USB1-213ENST00000566292 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
USB1-213ENST00000566292 SLC38A10Q9HBR0 1119 aa21.76■■□□□ 1.07
USB1-213ENST00000566292 HELLSQ9NRZ9 838 aa21.76■■□□□ 1.07
USB1-213ENST00000566292 A0A0D9SFI3 127 aa21.75■■□□□ 1.07
USB1-213ENST00000566292 ZBED4O75132 1171 aa21.75■■□□□ 1.07
USB1-213ENST00000566292 BMP3P12645 472 aa21.75■■□□□ 1.07
USB1-213ENST00000566292 TAL1P17542 331 aaPredicted RBP21.75■■□□□ 1.07
USB1-213ENST00000566292 RAVER2Q9HCJ3 691 aaKnown RBP21.75■■□□□ 1.07
USB1-213ENST00000566292 IL17RBQ9NRM6 502 aa21.75■■□□□ 1.07
USB1-213ENST00000566292 NRBP1Q9UHY1 535 aa21.75■■□□□ 1.07
USB1-213ENST00000566292 ANAPC4Q9UJX5 808 aa21.75■■□□□ 1.07
USB1-213ENST00000566292 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
USB1-213ENST00000566292 ALX1Q15699 326 aa21.74■■□□□ 1.07
USB1-213ENST00000566292 LTBP2Q14767 1821 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 DNAJC25-GNG10A0A024R161 153 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 TSPY2A6NKD2 308 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 TMEM232C9JQI7 657 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 KBTBD13C9JR72 458 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 NMT2O60551 498 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 IGHDP01880 384 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 LRRC41Q15345 812 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 MCMDC2Q4G0Z9 681 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 B4GALNT3Q6L9W6 998 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.73■■□□□ 1.07
USB1-213ENST00000566292 LRCH3Q96II8 777 aa21.73■■□□□ 1.07
USB1-213ENST00000566292 RWDD1Q9H446 243 aaPredicted RBP21.73■■□□□ 1.07
USB1-213ENST00000566292 CTDP1Q9Y5B0 961 aaPredicted RBP21.73■■□□□ 1.07
USB1-213ENST00000566292 MYCNP04198 464 aaPredicted RBP21.72■■□□□ 1.07
USB1-213ENST00000566292 FGRP09769 529 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 ZNF865P0CJ78 1059 aaPredicted RBP21.72■■□□□ 1.07
USB1-213ENST00000566292 RTP1P59025 263 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 NMIQ13287 307 aaPredicted RBP21.72■■□□□ 1.07
USB1-213ENST00000566292 ZNF589Q86UQ0 364 aaPredicted RBP21.72■■□□□ 1.07
USB1-213ENST00000566292 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 CHMP4CQ96CF2 233 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 DDX11Q96FC9 970 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 GMCL1Q96IK5 515 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 STX8Q9UNK0 236 aa21.72■■□□□ 1.07
USB1-213ENST00000566292 ORC4O43929 436 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 FGAP02671 866 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 MCCP23508 829 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 STAT2P52630 851 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 OAZ1P54368 228 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 SLC39A5Q6ZMH5 540 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 RASGRP2Q7LDG7 609 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 TICAM2Q86XR7 235 aa21.71■■□□□ 1.07
USB1-213ENST00000566292 TRIM6-TRIM34B2RNG4 842 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 RANBP6O60518 1105 aaKnown RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 SNAI1O95863 264 aaPredicted RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 RARBP10826 455 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 SLC1A4P43007 532 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 NOVP48745 357 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 MDM2Q00987 491 aaPredicted RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 PPP4R3BQ5MIZ7 849 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 MAMDC4Q6UXC1 1216 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 CHD1LQ86WJ1 897 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 MSL3Q8N5Y2 521 aaKnown RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 LENG1Q96BZ8 264 aaPredicted RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 UBE2OQ9C0C9 1292 aaKnown RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 XPNPEP3Q9NQH7 507 aa21.7■■□□□ 1.06
USB1-213ENST00000566292 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
USB1-213ENST00000566292 FDX1P10109 184 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 ADCYAP1R1P41586 468 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 SNX17Q15036 470 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 KCTD1Q719H9 257 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 FAM160B2Q86V87 743 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 PLEKHM2Q8IWE5 1019 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 TDHQ8IZJ6 230 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 CHST13Q8NET6 341 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 CHURC1Q8WUH1 139 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 STAG1Q8WVM7 1258 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 RILPL2Q969X0 211 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 FERMT2Q96AC1 680 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 FGD4Q96M96 766 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 FBXO40Q9UH90 709 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 CNPY2Q9Y2B0 182 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 ATP11BQ9Y2G3 1177 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 ZNF536O15090 1300 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 SYNGAP1Q96PV0 1343 aa21.69■■□□□ 1.06
USB1-213ENST00000566292 PLA2G6O60733 806 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 PGK1P00558 417 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 AKR1A1P14550 325 aa21.68■■□□□ 1.06
USB1-213ENST00000566292 NUCB1Q02818 461 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms