RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 TMTC3Q6ZXV5 915 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 ANKRD23Q86SG2 305 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 STAG2Q8N3U4 1231 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 CHURC1Q8WUH1 139 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 LZTS2Q9BRK4 669 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
SPG7-213ENST00000566221 GPCPD1Q9NPB8 672 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
SPG7-213ENST00000566221 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 CPLX1O14810 134 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 CDC27P30260 824 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
SPG7-213ENST00000566221 RGS19P49795 217 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 INHBEP58166 350 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
SPG7-213ENST00000566221 SCRN1Q12765 414 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 GPAT2Q6NUI2 795 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
SPG7-213ENST00000566221 BTNL9Q6UXG8 535 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 FAM217BQ9NTX9 383 aaPredicted RBP17.2■□□□□ 0.34
SPG7-213ENST00000566221 MYPNQ86TC9 1320 aa17.2■□□□□ 0.34
SPG7-213ENST00000566221 FLOT1O75955 427 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 CDKL5O76039 1030 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 SMARCA1P28370 1054 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 IRX3P78415 501 aaPredicted RBP17.19■□□□□ 0.34
SPG7-213ENST00000566221 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
SPG7-213ENST00000566221 NECAB1Q8N987 351 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 IPO9Q96P70 1041 aaKnown RBP17.19■□□□□ 0.34
SPG7-213ENST00000566221 SLF1Q9BQI6 1058 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 SPZ1Q9BXG8 430 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
SPG7-213ENST00000566221 PNMA3Q9UL41 463 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
SPG7-213ENST00000566221 BTBD19C9JJ37 291 aa17.18■□□□□ 0.34
SPG7-213ENST00000566221 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
SPG7-213ENST00000566221 TTBK2Q6IQ55 1244 aa17.18■□□□□ 0.34
SPG7-213ENST00000566221 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
SPG7-213ENST00000566221 WDR33Q9C0J8 1336 aaKnown RBP17.18■□□□□ 0.34
SPG7-213ENST00000566221 SMCHD1A6NHR9 2005 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 PDHXO00330 501 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 IFNAR1P17181 557 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 OSBPP22059 807 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 SLC16A2P36021 539 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 KIF23Q02241 960 aaPredicted RBP17.17■□□□□ 0.34
SPG7-213ENST00000566221 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 OTUD7BQ6GQQ9 843 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
SPG7-213ENST00000566221 PRPF38AQ8NAV1 312 aaKnown RBP17.17■□□□□ 0.34
SPG7-213ENST00000566221 LLPHQ9BRT6 129 aaKnown RBP17.17■□□□□ 0.34
SPG7-213ENST00000566221 BEGAINQ9BUH8 593 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
SPG7-213ENST00000566221 FBXO28Q9NVF7 368 aa17.17■□□□□ 0.34
SPG7-213ENST00000566221 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPG7-213ENST00000566221 AOC2O75106 756 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 FDX1P10109 184 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 MAP2K2P36507 400 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 TM4SF4P48230 202 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 FUT2Q10981 343 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 CUL4AQ13619 759 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 COG2Q14746 738 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 NTRK3Q16288 839 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 NBPF11Q86T75 865 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 IFNL1Q8IU54 200 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 ADGRF4Q8IZF3 695 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 KIFC2Q96AC6 838 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 PARK7Q99497 189 aaKnown RBP17.16■□□□□ 0.34
SPG7-213ENST00000566221 PTPN18Q99952 460 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 RIOX1Q9H6W3 641 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 HOXC10Q9NYD6 342 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
SPG7-213ENST00000566221 DAXXQ9UER7 740 aaPredicted RBP17.16■□□□□ 0.34
SPG7-213ENST00000566221 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
SPG7-213ENST00000566221 SPDYE16A6NNV3 312 aaPredicted RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 CYTH3O43739 400 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 DSG3P32926 999 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 SLC35G1Q2M3R5 365 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 LBX2Q6XYB7 198 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 TRIM22Q8IYM9 498 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 CCDC82Q8N4S0 544 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 NSUN7Q8NE18 718 aaKnown RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 RRP36Q96EU6 259 aaKnown RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 RNF26Q9BY78 433 aaPredicted RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
SPG7-213ENST00000566221 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
SPG7-213ENST00000566221 FMNL1O95466 1100 aaPredicted RBP17.14■□□□□ 0.33
SPG7-213ENST00000566221 CTDNEP1O95476 244 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms