RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CXXC1Q9P0U4 656 aaPredicted RBP3.55□□□□□ -1.84
CHD9-216ENST00000565803 STK26Q9P289 416 aa3.55□□□□□ -1.84
CHD9-216ENST00000565803 TBK1Q9UHD2 729 aa3.55□□□□□ -1.84
CHD9-216ENST00000565803 ITGB4P16144 1822 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PAPPA2Q9BXP8 1791 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 TMCO5BA8MYB1 307 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PRRT4C9JH25 899 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 H0Y3Z8 333 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PDE8AO60658 829 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 GFPT2O94808 682 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SLC3A2P08195 630 aaKnown RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 HSPA4P34932 840 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SOX5P35711 763 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PLA2G4AP47712 749 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SARSP49591 514 aaKnown RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 DAB2P98082 770 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SFSWAPQ12872 951 aaKnown RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 EML3Q32P44 896 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PODNQ7Z5L7 613 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SRLQ86TD4 932 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 MYLK4Q86YV6 388 aaPredicted RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 NELL1Q92832 810 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 DCAF5Q96JK2 942 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 FMNL2Q96PY5 1086 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 FSD1Q9BTV5 496 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PRO3102Q9H379 93 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHD9-216ENST00000565803 IRAK4Q9NWZ3 460 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 RGS20O76081 388 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PYGLP06737 847 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 TGFB3P10600 412 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 IDEP14735 1019 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 ATP6V1AP38606 617 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 ATP1A2P50993 1020 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SATB1Q01826 763 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 DNM1Q05193 864 aaKnown RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 MCL1Q07820 350 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 SMC1AQ14683 1233 aaKnown RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 MAP3K11Q16584 847 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 TMEM95Q3KNT9 176 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 CCDC102BQ68D86 513 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 FAM160A2Q8N612 972 aaPredicted RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.54□□□□□ -1.84
CHD9-216ENST00000565803 USP6NLQ92738 828 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 TAF4BQ92750 862 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 PGBD4Q96DM1 585 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 HERPUD2Q9BSE4 406 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 RABEP2Q9H5N1 569 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 TRMT1Q9NXH9 659 aaKnown RBP3.54□□□□□ -1.84
CHD9-216ENST00000565803 RAI14Q9P0K7 980 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 EGFL7Q9UHF1 273 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 TTLL3Q9Y4R7 772 aa3.54□□□□□ -1.84
CHD9-216ENST00000565803 CCDC88AQ3V6T2 1871 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CPLX1O14810 134 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 TREHO43280 583 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 FAM13AO94988 1023 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SLC5A1P13866 664 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 GNA15P30679 374 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 ST13P50502 369 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 TMF1P82094 1093 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 TMPRSS15P98073 1019 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SSRP1Q08945 709 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 RAB33AQ14088 237 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 NUTM2GQ5VZR2 741 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 PDXDC1Q6P996 788 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 DNAJB7Q7Z6W7 309 aaPredicted RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 PASD1Q8IV76 773 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 WDR66Q8TBY9 1149 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 HLA-CQ95604 372 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 ZNF496Q96IT1 587 aaPredicted RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 OCSTAMPQ9BR26 566 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 COPRSQ9NQ92 184 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CNTN3Q9P232 1028 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 LUC7L2Q9Y383 392 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 PPIP5K1Q6PFW1 1433 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 LTBP3Q9NS15 1303 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 GTPBP10A4D1E9 387 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 CFAP99D6REC4 459 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 APAF1O14727 1248 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SETSIPP0DME0 302 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 COL6A1P12109 1028 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 XBP1P17861 261 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 IL4RP24394 825 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SKOR1P84550 965 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CALD1Q05682 793 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 DMTNQ08495 405 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SLC9A5Q14940 896 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 ITPRIPL1Q6GPH6 555 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 LLGL2Q6P1M3 1020 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 ANKRD13DQ6ZTN6 518 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.53□□□□□ -1.84
CHD9-216ENST00000565803 USP33Q8TEY7 942 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 UCMAQ8WVF2 138 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CRBNQ96SW2 442 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 HELLSQ9NRZ9 838 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 PCDHGB3Q9Y5G1 929 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 LAMB2P55268 1798 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CCP110O43303 1012 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 PGRP06401 933 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CPEP16870 476 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms