RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 RUFY2Q8WXA3 655 aa19.77■□□□□ 0.76
USB1-211ENST00000565662 DSCC1Q9BVC3 393 aa19.77■□□□□ 0.76
USB1-211ENST00000565662 TOMM22Q9NS69 142 aa19.77■□□□□ 0.76
USB1-211ENST00000565662 FOXP2O15409 715 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 EVI5O60447 810 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 NOVP48745 357 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 CCL14Q16627 93 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 TKFCQ3LXA3 575 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 SNRNP48Q6IEG0 339 aaKnown RBP19.76■□□□□ 0.75
USB1-211ENST00000565662 SAMD1Q6SPF0 538 aaPredicted RBP19.76■□□□□ 0.75
USB1-211ENST00000565662 MFSD6Q6ZSS7 791 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 REPS2Q8NFH8 660 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 DCAF4Q8WV16 495 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 ESR2Q92731 530 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 TTC14Q96N46 770 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 C11orf49Q9H6J7 331 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 SLC38A10Q9HBR0 1119 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 FBXO28Q9NVF7 368 aa19.76■□□□□ 0.75
USB1-211ENST00000565662 DDX20Q9UHI6 824 aaKnown RBP19.76■□□□□ 0.75
USB1-211ENST00000565662 PLXNA1Q9UIW2 1896 aa19.75■□□□□ 0.75
USB1-211ENST00000565662 ZNFX1Q9P2E3 1918 aaKnown RBP19.75■□□□□ 0.75
USB1-211ENST00000565662 ZNF213O14771 459 aa19.75■□□□□ 0.75
USB1-211ENST00000565662 IKQ13123 557 aaPredicted RBP19.75■□□□□ 0.75
USB1-211ENST00000565662 FAM47AQ5JRC9 791 aa19.75■□□□□ 0.75
USB1-211ENST00000565662 AKNAD1Q5T1N1 836 aa19.75■□□□□ 0.75
USB1-211ENST00000565662 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
USB1-211ENST00000565662 LRRC47Q8N1G4 583 aaKnown RBP19.75■□□□□ 0.75
USB1-211ENST00000565662 IGHA2P01877 340 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 TOP1P11387 765 aaKnown RBP19.74■□□□□ 0.75
USB1-211ENST00000565662 CYBAP13498 195 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 TRIM32Q13049 653 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 IMMTQ16891 758 aaKnown RBP19.74■□□□□ 0.75
USB1-211ENST00000565662 ZNF589Q86UQ0 364 aaPredicted RBP19.74■□□□□ 0.75
USB1-211ENST00000565662 IQCA1Q86XH1 822 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 ARRDC4Q8NCT1 418 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 NPLOC4Q8TAT6 608 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 KIFC2Q96AC6 838 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 PAWRQ96IZ0 340 aaKnown RBP19.74■□□□□ 0.75
USB1-211ENST00000565662 MAML3Q96JK9 1138 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 CNNM2Q9H8M5 875 aa19.74■□□□□ 0.75
USB1-211ENST00000565662 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
USB1-211ENST00000565662 SEPT4O43236 478 aa19.73■□□□□ 0.75
USB1-211ENST00000565662 CWC27Q6UX04 472 aaKnown RBP19.73■□□□□ 0.75
USB1-211ENST00000565662 ZNF467Q7Z7K2 595 aaPredicted RBP19.73■□□□□ 0.75
USB1-211ENST00000565662 DDX11Q96FC9 970 aa19.73■□□□□ 0.75
USB1-211ENST00000565662 SYNGAP1Q96PV0 1343 aa19.73■□□□□ 0.75
USB1-211ENST00000565662 TMEM232C9JQI7 657 aa19.72■□□□□ 0.75
USB1-211ENST00000565662 DNM1LO00429 736 aa19.72■□□□□ 0.75
USB1-211ENST00000565662 CNGA1P29973 690 aa19.72■□□□□ 0.75
USB1-211ENST00000565662 CCND3P30281 292 aaPredicted RBP19.72■□□□□ 0.75
USB1-211ENST00000565662 TTC22Q5TAA0 569 aa19.72■□□□□ 0.75
USB1-211ENST00000565662 NUP88Q99567 741 aaPredicted RBP19.72■□□□□ 0.75
USB1-211ENST00000565662 CNPY2Q9Y2B0 182 aa19.72■□□□□ 0.75
USB1-211ENST00000565662 PFASO15067 1338 aa19.72■□□□□ 0.75
USB1-211ENST00000565662 A0A1W2PPC1 479 aa19.71■□□□□ 0.75
USB1-211ENST00000565662 RRP12Q5JTH9 1297 aaKnown RBP19.71■□□□□ 0.75
USB1-211ENST00000565662 LHX8Q68G74 356 aa19.71■□□□□ 0.75
USB1-211ENST00000565662 TINF2Q9BSI4 451 aa19.71■□□□□ 0.75
USB1-211ENST00000565662 ACAD9Q9H845 621 aa19.71■□□□□ 0.75
USB1-211ENST00000565662 FLRT1Q9NZU1 646 aa19.71■□□□□ 0.75
USB1-211ENST00000565662 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 COBLO75128 1261 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 CYP2C19P33261 490 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 ZNF792Q3KQV3 632 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 DGKHQ86XP1 1220 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 ANKRD35Q8N283 1001 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 KRT23Q9C075 422 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 MAF1Q9H063 256 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 IL17RBQ9NRM6 502 aa19.7■□□□□ 0.74
USB1-211ENST00000565662 H0YGN5 161 aa19.69■□□□□ 0.74
USB1-211ENST00000565662 CCDC96Q2M329 555 aa19.69■□□□□ 0.74
USB1-211ENST00000565662 GPATCH4Q5T3I0 446 aaKnown RBP19.69■□□□□ 0.74
USB1-211ENST00000565662 MAMDC4Q6UXC1 1216 aa19.69■□□□□ 0.74
USB1-211ENST00000565662 LOC102724159A0A0B4J2E5 919 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 SLC34A2O95436 690 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 RARBP10826 455 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 COL6A1P12109 1028 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 AKR1A1P14550 325 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 MCCP23508 829 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 PWP2Q15269 919 aaKnown RBP19.68■□□□□ 0.74
USB1-211ENST00000565662 BTNL9Q6UXG8 535 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 CPXCR1Q8N123 301 aa19.68■□□□□ 0.74
USB1-211ENST00000565662 DNAJC25-GNG10A0A024R161 153 aa19.67■□□□□ 0.74
USB1-211ENST00000565662 TRDNQ13061 729 aa19.67■□□□□ 0.74
USB1-211ENST00000565662 RAVER2Q9HCJ3 691 aaKnown RBP19.67■□□□□ 0.74
USB1-211ENST00000565662 HAND2P61296 217 aa19.66■□□□□ 0.74
USB1-211ENST00000565662 HABP4Q5JVS0 413 aaKnown RBP19.66■□□□□ 0.74
USB1-211ENST00000565662 RNF180Q86T96 592 aa19.66■□□□□ 0.74
USB1-211ENST00000565662 DIS3LQ8TF46 1054 aaKnown RBP19.66■□□□□ 0.74
USB1-211ENST00000565662 MPHOSPH6Q99547 160 aaKnown RBP19.66■□□□□ 0.74
USB1-211ENST00000565662 TMEM47Q9BQJ4 181 aa19.66■□□□□ 0.74
USB1-211ENST00000565662 ALPK3Q96L96 1907 aa19.66■□□□□ 0.74
USB1-211ENST00000565662 ASB14A6NK59 587 aa19.65■□□□□ 0.74
USB1-211ENST00000565662 ICAM1P05362 532 aa19.65■□□□□ 0.74
USB1-211ENST00000565662 MNX1P50219 401 aaPredicted RBP19.65■□□□□ 0.74
USB1-211ENST00000565662 KCTD1Q719H9 257 aa19.65■□□□□ 0.74
USB1-211ENST00000565662 RANBP17Q9H2T7 1088 aaKnown RBP19.65■□□□□ 0.74
USB1-211ENST00000565662 ABHD16BQ9H3Z7 469 aa19.65■□□□□ 0.74
USB1-211ENST00000565662 RNF146Q9NTX7 359 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms