RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 MKNK2Q9HBH9 465 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 ECHDC1Q9NTX5 307 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 NYAP2Q9P242 653 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 SYNGAP1Q96PV0 1343 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 SYNRGQ9UMZ2 1314 aa13.87□□□□□ -0.19
NSMCE1-209ENST00000565384 SMCHD1A6NHR9 2005 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 SNAI1O95863 264 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 EPHB4P54760 987 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 GIMAP6Q6P9H5 292 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 KBTBD3Q8NAB2 608 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 MYLIPQ8WY64 445 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 APPBP2Q92624 585 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 DDX11Q96FC9 970 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 TSEN34Q9BSV6 310 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 STARD7Q9NQZ5 370 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 ZHX1Q9UKY1 873 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 FAM184BQ9ULE4 1060 aa13.86□□□□□ -0.19
NSMCE1-209ENST00000565384 DNAJC25-GNG10A0A024R161 153 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 MOXD2PA6NHM9 499 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 SLC4A3P48751 1232 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 ACLYP53396 1101 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 FPGSQ05932 587 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 MAMDC4Q6UXC1 1216 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 CPXCR1Q8N123 301 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 KLHDC9Q8NEP7 349 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 OSBP2Q969R2 916 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 EPB41L4AQ9HCS5 686 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 RCAN3Q9UKA8 241 aa13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
NSMCE1-209ENST00000565384 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 GPAA1O43292 621 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 ZBED4O75132 1171 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 TDO2P48775 406 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 FAAP100Q0VG06 881 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 CCSAPQ6IQ19 270 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 ZNF467Q7Z7K2 595 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 ZNF444Q8N0Y2 327 aaPredicted RBP13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 NUP133Q8WUM0 1156 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 KIFC2Q96AC6 838 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
NSMCE1-209ENST00000565384 TMEM265A0A087WTH1 108 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 M0R2C6 588 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 RNF113AO15541 343 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 DUSP11O75319 330 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 PRDM1O75626 825 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 FOSL2P15408 326 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 GNAT2P19087 354 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 KCNA10Q16322 511 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 LRRC47Q8N1G4 583 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 CEP95Q96GE4 821 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 GPATCH3Q96I76 525 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 SLC38A10Q9HBR0 1119 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 ZNF287Q9HBT7 754 aa13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
NSMCE1-209ENST00000565384 ZFYP08048 801 aaPredicted RBP13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 C6orf222P0C671 652 aaPredicted RBP13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 CST5P28325 142 aaPredicted RBP13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 OAZ1P54368 228 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 IRX5P78411 483 aaPredicted RBP13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 ACVR2BQ13705 512 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 ANKRD35Q8N283 1001 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 MKL1Q969V6 931 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 FGD4Q96M96 766 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 GLT1D1Q96MS3 346 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 MTMR4Q9NYA4 1195 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 FBXO40Q9UH90 709 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 FEM1BQ9UK73 627 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 SYNPO2Q9UMS6 1093 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 PLIN4Q96Q06 1357 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 MYH4Q9Y623 1939 aa13.82□□□□□ -0.2
NSMCE1-209ENST00000565384 ADCY6O43306 1168 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 TTLL1O95922 423 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 TIMP1P01033 207 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 APPP05067 770 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 ASGR1P07306 291 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 CCDC144BQ3MJ40 725 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 ARMCX2Q7L311 632 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 PCSK9Q8NBP7 692 aaKnown RBP13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 UPF3AQ9H1J1 476 aaKnown RBP13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 ABHD16BQ9H3Z7 469 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 SPC25Q9HBM1 224 aa13.81□□□□□ -0.2
NSMCE1-209ENST00000565384 TBX21Q9UL17 535 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms