RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ANKRD42Q8N9B4 389 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 KIF2CQ99661 725 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 GCNT3O95395 438 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ICE2Q659A1 982 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 LRRC8AQ8IWT6 810 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 SSH2Q76I76 1423 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 HSPA6P17066 643 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 EEF1GP26641 437 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 IFNA8P32881 189 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 RNASE9P60153 205 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 ADCY2Q08462 1091 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 GLE1Q53GS7 698 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 ENAHQ8N8S7 591 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 FBXL13Q8NEE6 735 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 ZNF215Q9UL58 517 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 CCDC78A2IDD5 438 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 CTNND1O60716 968 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 KRT10P13645 584 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 AOC3Q16853 763 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 NCAPH2Q6IBW4 605 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 APLFQ8IW19 511 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 UIMC1Q96RL1 719 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 USP26Q9BXU7 913 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ARAP1Q96P48 1450 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 GTPBP10A4D1E9 387 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 PI4KAP2A4QPH2 592 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 CHMLP26374 656 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 BIRC2Q13490 618 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 PI4KAP1Q8N8J0 262 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 CATSPER1Q8NEC5 780 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 HOOK2Q96ED9 719 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 TMEM60Q9H2L4 133 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 STOML1Q9UBI4 398 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ECE1P42892 770 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 NR1H3Q13133 447 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 DCTPP1Q9H773 170 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ZBTB24O43167 697 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 SPAG7O75391 227 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ESRRBO95718 433 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 IGHDP01880 384 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 PPARGP37231 505 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 TNNI2P48788 182 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 IRX1P78414 480 aaPredicted RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 MRPL28Q13084 256 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 MTX1Q13505 466 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 SCYL1Q96KG9 808 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 TRAIPQ9BWF2 469 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ING2Q9H160 280 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 SNRKQ9NRH2 765 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 CHGBP05060 677 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 HNRNPCP07910 306 aaKnown RBP eCLIP5.55□□□□□ -1.526e-6■■■■□ 19.3
SMG1-211ENST00000565324 C8orf34Q49A92 452 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 TYW1BQ6NUM6 668 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.55□□□□□ -1.525e-6■■■■□ 22.3
SMG1-211ENST00000565324 IGF1RP08069 1367 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ATP8B2P98198 1209 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 LETM2Q2VYF4 491 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 RRAGAQ7L523 313 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 OTUD6AQ7L8S5 288 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 RETREG2Q8NC44 543 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 PIP4K2CQ8TBX8 421 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 NDE1Q9NXR1 346 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 SLC13A4Q9UKG4 626 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 TRIM33Q9UPN9 1127 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 ACTN1P12814 892 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 AP2B1P63010 937 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 GRIN1Q05586 938 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 FAM133BQ5BKY9 247 aaKnown RBP5.55□□□□□ -1.52
SMG1-211ENST00000565324 MEIS3Q99687 375 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 SNX5Q9Y5X3 404 aa5.55□□□□□ -1.52
SMG1-211ENST00000565324 PDE6AP16499 860 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 MDM2Q00987 491 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 ARHGEF10LQ9HCE6 1279 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 CDV3Q9UKY7 258 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 NPR1P16066 1061 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 FSCBQ5H9T9 825 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 NBPF5PQ86XG9 351 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 OR9Q1Q8NGQ5 310 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 GSDMAQ96QA5 445 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 MAST3O60307 1309 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 TMEM247A6NEH6 219 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 KDM1AO60341 852 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 RPSAP08865 295 aaKnown RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 ESRRAP11474 423 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 PDE6CP51160 858 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 GUCY2DQ02846 1103 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 KLC3Q6P597 504 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 SESTD1Q86VW0 696 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 IFNL2Q8IZJ0 200 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 POMGNT1Q8WZA1 660 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 MTBPQ96DY7 904 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 RPS6KC1Q96S38 1066 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 ZBTB12Q9Y330 459 aaPredicted RBP5.54□□□□□ -1.52
SMG1-211ENST00000565324 NFE2L3Q9Y4A8 694 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 PLXNC1O60486 1568 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 FRMD3A2A2Y4 597 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 H7C1D1 291 aa5.54□□□□□ -1.52
SMG1-211ENST00000565324 IPO5O00410 1097 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms