RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 HOXC10Q9NYD6 342 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 THRAP3Q9Y2W1 955 aaKnown RBP5.98□□□□□ -1.45
CAPN3-214ENST00000565274 ITSN1Q15811 1721 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 MAP3K19Q56UN5 1328 aa5.98□□□□□ -1.45
CAPN3-214ENST00000565274 FAM83GA6ND36 823 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PABPN1LA6NDY0 278 aaKnown RBP5.97□□□□□ -1.45
CAPN3-214ENST00000565274 POM121CA8CG34 1229 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 ERC2O15083 957 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 S100BP04271 92 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-214ENST00000565274 RBP3P10745 1247 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 SDSP20132 328 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 LTKP29376 864 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 MAGEA8P43361 318 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PDE1AP54750 535 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 KCNQ4P56696 695 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 CUL4AQ13619 759 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 DCTN1Q14203 1278 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 ZSCAN23Q3MJ62 389 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PSAPL1Q6NUJ1 521 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PDXDC1Q6P996 788 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 RELL1Q8IUW5 271 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 ALDH16A1Q8IZ83 802 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PHC3Q8NDX5 983 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 SMCR8Q8TEV9 937 aaPredicted RBP5.97□□□□□ -1.45
CAPN3-214ENST00000565274 ZBTB9Q96C00 473 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 INTS4Q96HW7 963 aaKnown RBP5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PNMA5Q96PV4 448 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 FMNL2Q96PY5 1086 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 VRTNQ9H8Y1 702 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 LMBRD1Q9NUN5 540 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 DNAJB12Q9NXW2 375 aaKnown RBP5.97□□□□□ -1.45
CAPN3-214ENST00000565274 TMCC3Q9ULS5 477 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 RABL2BQ9UNT1 228 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 ZKSCAN5Q9Y2L8 839 aa5.97□□□□□ -1.45
CAPN3-214ENST00000565274 PEAK1Q9H792 1746 aa5.96□□□□□ -1.45
CAPN3-214ENST00000565274 LMTK3Q96Q04 1460 aa5.96□□□□□ -1.45
CAPN3-214ENST00000565274 LRRC37A3O60309 1634 aa5.96□□□□□ -1.45
CAPN3-214ENST00000565274 ANKRD18BA2A2Z9 1011 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 TULP2O00295 520 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 IFRD1O00458 451 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 ELL2O00472 640 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 GNAI2P04899 355 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 MTHFSDQ2M296 383 aaKnown RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CCDC93Q567U6 631 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CCDC30Q5VVM6 783 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 MSL1Q68DK7 614 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 SASS6Q6UVJ0 657 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CDC37L1Q7L3B6 337 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 BTLAQ7Z6A9 289 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 ELOA2Q8IYF1 753 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 NDUFAF2Q8N183 169 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CLASRPQ8N2M8 674 aaKnown RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 STAG2Q8N3U4 1231 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CHCHD4Q8N4Q1 142 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 SMARCC1Q92922 1105 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 LENG1Q96BZ8 264 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.96□□□□□ -1.46
CAPN3-214ENST00000565274 TANGO6Q9C0B7 1094 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CD248Q9HCU0 757 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 CCDC39Q9UFE4 941 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 ZNF652Q9Y2D9 606 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 EID1Q9Y6B2 187 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 ADGRL3Q9HAR2 1447 aa5.96□□□□□ -1.46
CAPN3-214ENST00000565274 MSH6P52701 1360 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 CEMIPQ8WUJ3 1361 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 RIMS1Q86UR5 1692 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 TUBGCP6Q96RT7 1819 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 UQCRHLA0A096LP55 91 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 DYTNA2CJ06 578 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 TMEM88BA6NKF7 163 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 DYNC1I1O14576 645 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 HYAL3O43820 417 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 LGR5O75473 907 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 RGS9O75916 674 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 MBD3O95983 291 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 UQCRHP07919 91 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 CCDC175P0C221 793 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 H2AFB1P0C5Y9 115 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 H2AFB2P0C5Z0 115 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 ERCC5P28715 1186 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 USP5P45974 858 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 AFF1P51825 1210 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 NRG1Q02297 640 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 NWD1Q149M9 1564 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 TAF7Q15545 349 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 MCTP1Q6DN14 999 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 CAVIN1Q6NZI2 390 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 LRSAM1Q6UWE0 723 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 MCM10Q7L590 875 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 C16orf71Q8IYS4 520 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 THEMISQ8N1K5 641 aaPredicted RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 MNS1Q8NEH6 495 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 ADAMTS19Q8TE59 1207 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 SSH3Q8TE77 659 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 GIMAP1Q8WWP7 306 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 SCG3Q8WXD2 468 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 JDP2Q8WYK2 163 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 RTF1Q92541 710 aaKnown RBP5.95□□□□□ -1.46
CAPN3-214ENST00000565274 TTC14Q96N46 770 aa5.95□□□□□ -1.46
CAPN3-214ENST00000565274 MEIS3Q99687 375 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms