RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 OSBPL3Q9H4L5 887 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 SLC5A4Q9NY91 659 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 PCDH10Q9P2E7 1040 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 ANAPC4Q9UJX5 808 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 FEM1BQ9UK73 627 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 RIPK3Q9Y572 518 aa11.91□□□□□ -0.5
CMTM3-209ENST00000565003 ZNFX1Q9P2E3 1918 aaKnown RBP11.91□□□□□ -0.5
CMTM3-209ENST00000565003 RANBP2P49792 3224 aaKnown RBP11.91□□□□□ -0.5
CMTM3-209ENST00000565003 TSPY2A6NKD2 308 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 ATP2A1O14983 1001 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 ORC4O43929 436 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 FGAP02671 866 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 HSPD1P10809 573 aaKnown RBP11.9□□□□□ -0.5
CMTM3-209ENST00000565003 SYN1P17600 705 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 COPB2P35606 906 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 LRRC26Q2I0M4 334 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 ZNF792Q3KQV3 632 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 RASGRP2Q7LDG7 609 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 CPXCR1Q8N123 301 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 RILPL2Q969X0 211 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 CHMP4CQ96CF2 233 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 SLC38A10Q9HBR0 1119 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
CMTM3-209ENST00000565003 PLXNA1Q9UIW2 1896 aa11.9□□□□□ -0.5
CMTM3-209ENST00000565003 ZMYND8Q9ULU4 1186 aaPredicted RBP11.9□□□□□ -0.5
CMTM3-209ENST00000565003 SUPT16HQ9Y5B9 1047 aaKnown RBP11.9□□□□□ -0.5
CMTM3-209ENST00000565003 ZMYM6O95789 1325 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 CCDC171Q6TFL3 1326 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 DNM1LO00429 736 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 SEPT4O43236 478 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 RANBP6O60518 1105 aaKnown RBP11.89□□□□□ -0.51
CMTM3-209ENST00000565003 ZBED4O75132 1171 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 FGRP09769 529 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 BMP3P12645 472 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 SDSP20132 328 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 TICAM2Q86XR7 235 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 STX8Q9UNK0 236 aa11.89□□□□□ -0.51
CMTM3-209ENST00000565003 DNAJC25-GNG10A0A024R161 153 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 TAL1P17542 331 aaPredicted RBP11.88□□□□□ -0.51
CMTM3-209ENST00000565003 MCCP23508 829 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 SLC1A4P43007 532 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 NOVP48745 357 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 STAT2P52630 851 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 HAND2P61296 217 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 GJC2Q5T442 439 aaPredicted RBP11.88□□□□□ -0.51
CMTM3-209ENST00000565003 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 GDF15Q99988 308 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
CMTM3-209ENST00000565003 SENP6Q9GZR1 1112 aaPredicted RBP11.88□□□□□ -0.51
CMTM3-209ENST00000565003 ISY1Q9ULR0 285 aaKnown RBP11.88□□□□□ -0.51
CMTM3-209ENST00000565003 DIS3Q9Y2L1 958 aaKnown RBP11.88□□□□□ -0.51
CMTM3-209ENST00000565003 OAZ1P54368 228 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
CMTM3-209ENST00000565003 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 KCTD1Q719H9 257 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
CMTM3-209ENST00000565003 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 NRBP1Q9UHY1 535 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 MTMR7Q9Y216 660 aa11.87□□□□□ -0.51
CMTM3-209ENST00000565003 CTDP1Q9Y5B0 961 aaPredicted RBP11.87□□□□□ -0.51
CMTM3-209ENST00000565003 ZNF536O15090 1300 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 ZNF865P0CJ78 1059 aaPredicted RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 MAGEA10P43363 369 aaPredicted RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 SNAP25P60880 206 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 IKQ13123 557 aaPredicted RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 LRRC41Q15345 812 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 CWC27Q6UX04 472 aaKnown RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 FAM160B2Q86V87 743 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 CHST13Q8NET6 341 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 STAG1Q8WVM7 1258 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 LENG1Q96BZ8 264 aaPredicted RBP11.86□□□□□ -0.51
CMTM3-209ENST00000565003 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 FGD4Q96M96 766 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 HOMER2Q9NSB8 354 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 SMCHD1A6NHR9 2005 aa11.86□□□□□ -0.51
CMTM3-209ENST00000565003 A0A1W2PPC1 479 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 KBTBD13C9JR72 458 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 PLA2G6O60733 806 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 SNAI1O95863 264 aaPredicted RBP11.85□□□□□ -0.51
CMTM3-209ENST00000565003 FDX1P10109 184 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 RARBP10826 455 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 PDE4AP27815 886 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
CMTM3-209ENST00000565003 AKNAD1Q5T1N1 836 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 RCSD1Q6JBY9 416 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 MAMDC4Q6UXC1 1216 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
CMTM3-209ENST00000565003 CHURC1Q8WUH1 139 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 AGBL1Q96MI9 1066 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 TMEM47Q9BQJ4 181 aa11.85□□□□□ -0.51
CMTM3-209ENST00000565003 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms