RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 IDH3BO43837 385 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 BBOX1O75936 387 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 KIF4AO95239 1232 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 RAPGEF3O95398 923 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 U2AF1L5P0DN76 240 aaPredicted RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PDHBP11177 359 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 ATP2A2P16615 1042 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 CCNCP24863 283 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 LSP1P33241 339 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 S100A5P33763 92 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 HOXD12P35452 270 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 SCTRP47872 440 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 SCNN1BP51168 640 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 ZNF132P52740 706 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 USP14P54578 494 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 U2AF1Q01081 240 aaKnown RBP eCLIP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PPIDQ08752 370 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 E2F5Q15329 346 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PTGISQ16647 500 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 GSTA3Q16772 222 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PDCD4Q53EL6 469 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 SPDYCQ5MJ68 293 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 LARP1BQ659C4 914 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 TBC1D9BQ66K14 1250 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 NXNQ6DKJ4 435 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 ARMCX5Q6P1M9 558 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PI16Q6UXB8 463 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 CDC37L1Q7L3B6 337 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PASD1Q8IV76 773 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PLEKHM2Q8IWE5 1019 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 CACNA2D3Q8IZS8 1091 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC63Q8NA47 563 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 GDAP1Q8TB36 358 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 CAGE1Q8TC20 777 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC12Q8WUD4 166 aaPredicted RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 HAPLN3Q96S86 360 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 MTRQ99707 1265 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 TIPINQ9BVW5 301 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 DACT1Q9NYF0 836 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 RABL2AQ9UBK7 228 aaPredicted RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 LUC7L2Q9Y383 392 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PCDHB2Q9Y5E7 798 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 N6AMT1Q9Y5N5 214 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 FADS3Q9Y5Q0 445 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 USP16Q9Y5T5 823 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 PREX1Q8TCU6 1659 aa6.96□□□□□ -1.3
PTPN9-204ENST00000564970 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.3
PTPN9-204ENST00000564970 HTR3EA5X5Y0 456 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 TTC34A8MYJ7 566 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 HSF2BPO75031 334 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 LMNAP02545 664 aaKnown RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 PAEPP09466 180 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 PORP16435 677 aaPredicted RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 ATP6V1C1P21283 382 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 RXRBP28702 533 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CASP14P31944 242 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 LIFRP42702 1097 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 VSNL1P62760 191 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 GPSM2P81274 684 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 LACTBP83111 547 aaPredicted RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 ATP11AP98196 1134 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 ITIH4Q14624 930 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CFAP58Q5T655 872 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 GRAMD4Q6IC98 578 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 NEPROQ6NW34 567 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 POTEEQ6S8J3 1075 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 NANOGNBQ7Z5D8 188 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 C11orf74Q86VG3 221 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 NLRP14Q86W24 1093 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CROCCP3Q8IVE0 287 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 RASEFQ8IZ41 740 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 MYO1HQ8N1T3 1032 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CRACR2BQ8N4Y2 399 aaPredicted RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 EIF1ADQ8N9N8 165 aaKnown RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 TRIML1Q8N9V2 468 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 MYCBPAPQ8TBZ2 947 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 DQX1Q8TE96 717 aaKnown RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 FBF1Q8TES7 1133 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 WDR60Q8WVS4 1066 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 PTPRN2Q92932 1015 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC51Q96ER9 411 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 SNF8Q96H20 258 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 ABHD8Q96I13 439 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 ZNF570Q96NI8 536 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 NR1H4Q96RI1 486 aaPredicted RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 TUBGCP5Q96RT8 1024 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 CCT8L2Q96SF2 557 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 TSPYL2Q9H2G4 693 aaPredicted RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 STIM2Q9P246 746 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 SEL1LQ9UBV2 794 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 HESX1Q9UBX0 185 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 BAIAP2L1Q9UHR4 511 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 PUF60Q9UHX1 559 aaKnown RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 FBXO9Q9UK97 447 aaPredicted RBP6.95□□□□□ -1.3
PTPN9-204ENST00000564970 MAPK8IP1Q9UQF2 711 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 WDR7Q9Y4E6 1490 aa6.95□□□□□ -1.3
PTPN9-204ENST00000564970 AOX1Q06278 1338 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms