RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SH2D4AQ9H788 454 aa12.88□□□□□ -0.35
SF3B3-205ENST00000564899 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
SF3B3-205ENST00000564899 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
SF3B3-205ENST00000564899 LAMA2P24043 3122 aaKnown RBP12.87□□□□□ -0.35
SF3B3-205ENST00000564899 USP17L5A8MUK1 530 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-205ENST00000564899 RAD21O60216 631 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 PPFIA3O75145 1194 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 PLEKHA8P1O95397 391 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
SF3B3-205ENST00000564899 PDHBP11177 359 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 IFNAR1P17181 557 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 DDIT3P35638 169 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 GNAQP50148 359 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 NTRK3Q16288 839 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 NOL9Q5SY16 702 aaKnown RBP12.87□□□□□ -0.35
SF3B3-205ENST00000564899 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-205ENST00000564899 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
SF3B3-205ENST00000564899 PRO3102Q9H379 93 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 MAD2L2Q9UI95 211 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 SNCAIPQ9Y6H5 919 aa12.87□□□□□ -0.35
SF3B3-205ENST00000564899 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 UNCXA6NJT0 531 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 BTBD19C9JJ37 291 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-205ENST00000564899 CCDC96Q2M329 555 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 CMTR1Q8N1G2 835 aaKnown RBP12.86□□□□□ -0.35
SF3B3-205ENST00000564899 GMCL1P1Q8NEA9 526 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 DCAF4Q8WV16 495 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 PHKBQ93100 1093 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 FEZ1Q99689 392 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 SLC26A6Q9BXS9 759 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 ZFYVE28Q9HCC9 887 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 CHMP5Q9NZZ3 219 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-205ENST00000564899 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
SF3B3-205ENST00000564899 TMX2Q9Y320 296 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 KIF3AQ9Y496 699 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 STK36Q9NRP7 1315 aa12.86□□□□□ -0.35
SF3B3-205ENST00000564899 EYSQ5T1H1 3165 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 PALM3A6NDB9 673 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-205ENST00000564899 F5H6K3 240 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 DLL1O00548 723 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-205ENST00000564899 NDUFB10O96000 172 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 GOLGA8HP0CJ92 632 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 PTPRAP18433 802 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 PDCP20941 246 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 KLRC3Q07444 240 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 SSRP1Q08945 709 aaKnown RBP12.85□□□□□ -0.35
SF3B3-205ENST00000564899 ZNF543Q08ER8 600 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 UBE2Q1Q7Z7E8 422 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 NBPF11Q86T75 865 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
SF3B3-205ENST00000564899 CSADQ9Y600 493 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
SF3B3-205ENST00000564899 CNTNAP5Q8WYK1 1306 aa12.85□□□□□ -0.35
SF3B3-205ENST00000564899 IRF6O14896 467 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 TLR2O60603 784 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 FDPSP14324 419 aaKnown RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 SLC1A4P43007 532 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 GTF2A2P52657 109 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 NUCB2P80303 420 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 FUT2Q10981 343 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 ZYXQ15942 572 aaKnown RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 LARP1BQ659C4 914 aaKnown RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 SRBD1Q8N5C6 995 aaKnown RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 LRCH3Q96II8 777 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 RNF26Q9BY78 433 aaPredicted RBP12.84□□□□□ -0.35
SF3B3-205ENST00000564899 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 CPA4Q9UI42 421 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 DOCK1Q14185 1865 aa12.84□□□□□ -0.35
SF3B3-205ENST00000564899 SPDYE5A6NIY4 337 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 DEXIO95424 95 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 SYT1P21579 422 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 SPICE1Q8N0Z3 855 aa12.83□□□□□ -0.36
SF3B3-205ENST00000564899 WASF1Q92558 559 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms