RNA–Protein interactions for RNA: ENST00000564870.1

FANCA-216, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-216ENST00000564870 REPS2Q8NFH8 660 aa12.34□□□□□ -0.43
FANCA-216ENST00000564870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
FANCA-216ENST00000564870 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
FANCA-216ENST00000564870 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
FANCA-216ENST00000564870 NUP88Q99567 741 aaPredicted RBP12.34□□□□□ -0.43
FANCA-216ENST00000564870 MYADML2A6NDP7 307 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
FANCA-216ENST00000564870 CHGBP05060 677 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 ADD2P35612 726 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 PBX2P40425 430 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
FANCA-216ENST00000564870 SNRNP48Q6IEG0 339 aaKnown RBP12.33□□□□□ -0.44
FANCA-216ENST00000564870 CCSAPQ6IQ19 270 aaPredicted RBP12.33□□□□□ -0.44
FANCA-216ENST00000564870 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 C16orf59Q7L2K0 433 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 BOLA2Q9H3K6 86 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 PAG1Q9NWQ8 432 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 TBX21Q9UL17 535 aa12.33□□□□□ -0.44
FANCA-216ENST00000564870 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
FANCA-216ENST00000564870 CSF2RAP15509 400 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 COL9A1P20849 921 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.442e-10■■■■□ 19.6
FANCA-216ENST00000564870 TMEM240Q5SV17 173 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
FANCA-216ENST00000564870 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
FANCA-216ENST00000564870 SLF1Q9BQI6 1058 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 TEX13BQ9BXU2 312 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 PBX4Q9BYU1 374 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 PRDM12Q9H4Q4 367 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 RIPK3Q9Y572 518 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 SLC4A4Q9Y6R1 1079 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
FANCA-216ENST00000564870 DUSP11O75319 330 aaKnown RBP12.31□□□□□ -0.44
FANCA-216ENST00000564870 ACRP10323 421 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 CDK7P50613 346 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 ACVR2BQ13705 512 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 MAMDC4Q6UXC1 1216 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 ZNF365Q70YC5 407 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 CPXCR1Q8N123 301 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
FANCA-216ENST00000564870 PPP1R12CQ9BZL4 782 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.445e-10■■■■■ 39.9
FANCA-216ENST00000564870 CTDP1Q9Y5B0 961 aaPredicted RBP12.31□□□□□ -0.44
FANCA-216ENST00000564870 ELP1O95163 1332 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 MROH7Q68CQ1 1323 aa12.31□□□□□ -0.44
FANCA-216ENST00000564870 COL11A1P12107 1806 aaPredicted RBP12.3□□□□□ -0.44
FANCA-216ENST00000564870 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 ADCY6O43306 1168 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 ASGR1P07306 291 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 CCDC85BQ15834 202 aaPredicted RBP12.3□□□□□ -0.44
FANCA-216ENST00000564870 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 GNASQ5JWF2 1037 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 TMEM199Q8N511 208 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 PCSK9Q8NBP7 692 aaKnown RBP12.3□□□□□ -0.44
FANCA-216ENST00000564870 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.3□□□□□ -0.44
FANCA-216ENST00000564870 RAPGEFL1Q9UHV5 662 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 BAZ2AQ9UIF9 1905 aaKnown RBP12.3□□□□□ -0.44
FANCA-216ENST00000564870 PARP14Q460N5 1801 aa12.3□□□□□ -0.44
FANCA-216ENST00000564870 PLXNA1Q9UIW2 1896 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 CHD7Q9P2D1 2997 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 F5H6K3 240 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 ARVCFO00192 962 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 ZBED4O75132 1171 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 NDUFB10O96000 172 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 ATP5JP18859 108 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 IGFBP4P22692 258 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 CST5P28325 142 aaPredicted RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 CYP2C18P33260 490 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 GJA9P57773 515 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 KLRC3Q07444 240 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 ADGRE1Q14246 886 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 PSRC1Q6PGN9 363 aaPredicted RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 ZNF467Q7Z7K2 595 aaPredicted RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 ASB2Q96Q27 587 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 HAUS7Q99871 368 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
FANCA-216ENST00000564870 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 MYH8P13535 1937 aa12.29□□□□□ -0.44
FANCA-216ENST00000564870 TLR3O15455 904 aaKnown RBP12.28□□□□□ -0.44
FANCA-216ENST00000564870 HMMRO75330 724 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms