RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 SLC10A5Q5PT55 438 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 FKBP15Q5T1M5 1219 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 SOGA3Q5TF21 947 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 MCTP2Q6DN12 878 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 ISM2Q6H9L7 571 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 RAB11FIP4Q86YS3 637 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 BLIDQ8IZY5 108 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 ZNF444Q8N0Y2 327 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 ENAHQ8N8S7 591 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 OR8K1Q8NGG5 319 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 ANKS1AQ92625 1134 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 AIFM3Q96NN9 605 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 CARD6Q9BX69 1037 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 NUCKS1Q9H1E3 243 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 C6orf50Q9HD87 102 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 MED4Q9NPJ6 270 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 PSD3Q9NYI0 1048 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 ADD3Q9UEY8 706 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 PRDM4Q9UKN5 801 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 KCNJ14Q9UNX9 436 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 LUC7L2Q9Y383 392 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 PCDHB6Q9Y5E3 794 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 PARP3Q9Y6F1 533 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 ABCB11O95342 1321 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 ABCA3Q99758 1704 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 ANO9A1A5B4 782 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 VWA3AA6NCI4 1184 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 TULP1O00294 542 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 PPFIA3O75145 1194 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 PNMA6AP0CW24 399 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 ATP2B1P20020 1258 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 TROAPQ12815 778 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 PTGDRQ13258 359 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 SEPT2Q15019 361 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 TMEM266Q2M3C6 531 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 CNNM4Q6P4Q7 775 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 FOXR2Q6PJQ5 311 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 LEKR1Q6ZMV7 388 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 CCDC84Q86UT8 332 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 DZIP1Q86YF9 867 aaKnown RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 DDX12PQ92771 950 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 EXOC4Q96A65 974 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 CALML4Q96GE6 196 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 RIOK1Q9BRS2 568 aaKnown RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 MYL10Q9BUA6 226 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 CCSER1Q9C0I3 900 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 FAM107BQ9H098 131 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 HSD3B7Q9H2F3 369 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 SEC63Q9UGP8 760 aaKnown RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 LEMD3Q9Y2U8 911 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
ATXN3-249ENST00000564606 COL22A1Q8NFW1 1626 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-249ENST00000564606 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 DUOX1Q9NRD9 1551 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 KCNJ18B7U540 433 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 ZRANB2O95218 330 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 RPN1P04843 607 aaKnown RBP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 AFMP43652 599 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 USP5P45974 858 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 COPB1P53618 953 aaKnown RBP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 RPS8P62241 208 aaKnown RBP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 NR5A1Q13285 461 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 CUL4BQ13620 913 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 KCNJ12Q14500 433 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 SPA17Q15506 151 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 COBLL1Q53SF7 1204 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 TCP11X2Q5H9J9 407 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 FIGNQ5HY92 759 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 KLHL10Q6JEL2 608 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 RSRC2Q7L4I2 434 aaKnown RBP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 ZNF804AQ7Z570 1209 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 GPIHBP1Q8IV16 184 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 TMEM139Q8IV31 216 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 FOXP4Q8IVH2 680 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 MIGA1Q8NAN2 632 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 EDEM3Q9BZQ6 932 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 VIPAS39Q9H9C1 493 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 VPS54Q9P1Q0 977 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 TSKSQ9UJT2 592 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-249ENST00000564606 NUP98P52948 1817 aa8.57□□□□□ -1.04
ATXN3-249ENST00000564606 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CHD4Q14839 1912 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 LAMB2P55268 1798 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 A0A1W2PQJ5 194 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 TARSL2A2RTX5 802 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms