RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ALDH1B1P30837 517 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 PDE6BP35913 854 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 NOVP48745 357 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 PTPN14Q15678 1187 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 E2F4Q16254 413 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 VSTM4Q8IW00 320 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 IQUBQ8NA54 791 aa18.77■□□□□ 0.6
CCNF-204ENST00000564333 TTF2Q9UNY4 1162 aaKnown RBP18.77■□□□□ 0.6
CCNF-204ENST00000564333 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.6
CCNF-204ENST00000564333 PLSCR1O15162 318 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 ZNF18P17022 549 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 ERCC5P28715 1186 aaPredicted RBP18.76■□□□□ 0.59
CCNF-204ENST00000564333 CASP1P29466 404 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 LONP1P36776 959 aaKnown RBP18.76■□□□□ 0.59
CCNF-204ENST00000564333 KCNJ6P48051 423 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 DMTNQ08495 405 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 CCDC12Q8WUD4 166 aaPredicted RBP18.76■□□□□ 0.59
CCNF-204ENST00000564333 CPVLQ9H3G5 476 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 GREB1LQ9C091 1923 aaPredicted RBP18.76■□□□□ 0.59
CCNF-204ENST00000564333 MMP10P09238 476 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 TXLNAP40222 546 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 NAPAP54920 295 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 DOK7Q18PE1 504 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 CT47A1Q5JQC4 288 aaPredicted RBP18.76■□□□□ 0.59
CCNF-204ENST00000564333 PDXDC2PQ6P474 469 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 USP17L2Q6R6M4 530 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 GSDMAQ96QA5 445 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 PARP3Q9Y6F1 533 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 SYNRGQ9UMZ2 1314 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 C10orf71Q711Q0 1435 aa18.76■□□□□ 0.59
CCNF-204ENST00000564333 ZNF646O15015 1829 aaPredicted RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 TMEM232C9JQI7 657 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 GABPAQ06546 454 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 NCBP1Q09161 790 aaKnown RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 INF2Q27J81 1249 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 HSP90AA4PQ58FG1 418 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 NYAP1Q6ZVC0 841 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 CCAR2Q8N163 923 aaKnown RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 RRP36Q96EU6 259 aaKnown RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 MASTLQ96GX5 879 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 DDX4Q9NQI0 724 aaKnown RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 INTS13Q9NVM9 706 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 SEC63Q9UGP8 760 aaKnown RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 RGPD3A6NKT7 1758 aaPredicted RBP18.75■□□□□ 0.59
CCNF-204ENST00000564333 RGPD4Q7Z3J3 1758 aa18.75■□□□□ 0.59
CCNF-204ENST00000564333 APBA3O96018 575 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 HOMER1Q86YM7 354 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 MED15Q96RN5 788 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 MXD3Q9BW11 206 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 ZMYND12Q9H0C1 365 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 TMX4Q9H1E5 349 aaPredicted RBP18.74■□□□□ 0.59
CCNF-204ENST00000564333 OGFRQ9NZT2 677 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 SMARCA1P28370 1054 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
CCNF-204ENST00000564333 G3V3G9 751 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 CDK11BP21127 795 aaKnown RBP18.73■□□□□ 0.59
CCNF-204ENST00000564333 SCNN1DP51172 638 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 CUL4BQ13620 913 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 DCAF8Q5TAQ9 597 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 KRT25Q7Z3Z0 450 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 STAMQ92783 540 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 USP40Q9NVE5 1235 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 PRDM4Q9UKN5 801 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 MYO3BQ8WXR4 1341 aa18.73■□□□□ 0.59
CCNF-204ENST00000564333 USP17L5A8MUK1 530 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 CCP110O43303 1012 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 GTPBP6O43824 516 aaPredicted RBP18.72■□□□□ 0.59
CCNF-204ENST00000564333 PDHBP11177 359 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 AKR1B1P15121 316 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 CD44P16070 742 aaKnown RBP18.72■□□□□ 0.59
CCNF-204ENST00000564333 KLHL10Q6JEL2 608 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 DTHD1Q6ZMT9 781 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 ARID3AQ99856 593 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 C6orf50Q9HD87 102 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 TRMT1Q9NXH9 659 aaKnown RBP18.72■□□□□ 0.59
CCNF-204ENST00000564333 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 SWAP70Q9UH65 585 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 SIPA1L1O43166 1804 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 IGKV6D-41A0A0C4DH26 115 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 LAD1O00515 517 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
CCNF-204ENST00000564333 SOGA3Q5TF21 947 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 MSL1Q68DK7 614 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 LRRC47Q8N1G4 583 aaKnown RBP18.72■□□□□ 0.59
CCNF-204ENST00000564333 TEKT1Q969V4 418 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 PIGSQ96S52 555 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 BLZF1Q9H2G9 400 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 TMEM60Q9H2L4 133 aa18.72■□□□□ 0.59
CCNF-204ENST00000564333 SAMSN1Q9NSI8 373 aaKnown RBP18.72■□□□□ 0.59
CCNF-204ENST00000564333 FRMPD2Q68DX3 1309 aaPredicted RBP18.71■□□□□ 0.59
CCNF-204ENST00000564333 GNA11P29992 359 aa18.71■□□□□ 0.59
CCNF-204ENST00000564333 STAT6P42226 847 aa18.71■□□□□ 0.59
CCNF-204ENST00000564333 PTPN21Q16825 1174 aa18.71■□□□□ 0.59
CCNF-204ENST00000564333 ASPRV1Q53RT3 343 aa18.71■□□□□ 0.59
CCNF-204ENST00000564333 SPATA1Q5VX52 437 aa18.71■□□□□ 0.59
CCNF-204ENST00000564333 E4F1Q66K89 784 aaPredicted RBP18.71■□□□□ 0.59
CCNF-204ENST00000564333 HHIPL2Q6UWX4 724 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms