RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 COPB2P35606 906 aa20.09■□□□□ 0.81
HDGFL3-203ENST00000563404 TLE2Q04725 743 aa20.09■□□□□ 0.81
HDGFL3-203ENST00000563404 SNRNP48Q6IEG0 339 aaKnown RBP20.09■□□□□ 0.81
HDGFL3-203ENST00000563404 FAM161BQ96MY7 647 aa20.09■□□□□ 0.81
HDGFL3-203ENST00000563404 TEX13BQ9BXU2 312 aa20.09■□□□□ 0.81
HDGFL3-203ENST00000563404 ADAMTS4O75173 837 aa20.08■□□□□ 0.81
HDGFL3-203ENST00000563404 SNAI1O95863 264 aaPredicted RBP20.08■□□□□ 0.81
HDGFL3-203ENST00000563404 SEC62Q99442 399 aaKnown RBP20.08■□□□□ 0.81
HDGFL3-203ENST00000563404 DNAJC25-GNG10A0A024R161 153 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 A0A1W2PQ45 241 aaPredicted RBP20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 A0A1W2PQY0 241 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 AKR1A1P14550 325 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 TDO2P48775 406 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 RNF180Q86T96 592 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 PRPF38AQ8NAV1 312 aaKnown RBP20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 MKL1Q969V6 931 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 CEP95Q96GE4 821 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 GPATCH3Q96I76 525 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 MTMR4Q9NYA4 1195 aa20.07■□□□□ 0.8
HDGFL3-203ENST00000563404 PATL2C9JE40 543 aaKnown RBP20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 ATP2A1O14983 1001 aa20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 ZFYP08048 801 aaPredicted RBP20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 IFNL3Q8IZI9 196 aa20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 CPXCR1Q8N123 301 aa20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 OTUD7AQ8TE49 926 aaPredicted RBP20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 FGD4Q96M96 766 aa20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
HDGFL3-203ENST00000563404 EYSQ5T1H1 3165 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 SYNGAP1Q96PV0 1343 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 APPP05067 770 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 GNAT2P19087 354 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 EPHB4P54760 987 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 IRX5P78411 483 aaPredicted RBP20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 MAMDC4Q6UXC1 1216 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 LRRC47Q8N1G4 583 aaKnown RBP20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 MSL3Q8N5Y2 521 aaKnown RBP20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 PI4K2BQ8TCG2 481 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 KIFC2Q96AC6 838 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 MYH4Q9Y623 1939 aa20.05■□□□□ 0.8
HDGFL3-203ENST00000563404 SYNRGQ9UMZ2 1314 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 MYADML2A6NDP7 307 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 ADCY6O43306 1168 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 ZBED4O75132 1171 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 CLTBP09497 229 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 CCSAPQ6IQ19 270 aaPredicted RBP20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.04■□□□□ 0.81e-6■□□□□ 9.8
HDGFL3-203ENST00000563404 KLHDC9Q8NEP7 349 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 DDX11Q96FC9 970 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 PCDHB15Q9Y5E8 787 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 TACC3Q9Y6A5 838 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 CDH23Q9H251 3354 aa20.04■□□□□ 0.8
HDGFL3-203ENST00000563404 KIAA0355O15063 1070 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 PQBP1O60828 265 aaKnown RBP20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 TTLL1O95922 423 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 ACLYP53396 1101 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 GMCL1P1Q8NEA9 526 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 TSEN34Q9BSV6 310 aaKnown RBP20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 FEM1BQ9UK73 627 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 ZHX1Q9UKY1 873 aaPredicted RBP20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 FAM184BQ9ULE4 1060 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 PLIN4Q96Q06 1357 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 CUL9Q8IWT3 2517 aa20.03■□□□□ 0.8
HDGFL3-203ENST00000563404 ZNF697Q5TEC3 545 aa20.02■□□□□ 0.8
HDGFL3-203ENST00000563404 SLFN13Q68D06 897 aa20.02■□□□□ 0.8
HDGFL3-203ENST00000563404 ZNF467Q7Z7K2 595 aaPredicted RBP20.02■□□□□ 0.8
HDGFL3-203ENST00000563404 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.8
HDGFL3-203ENST00000563404 SYNPO2Q9UMS6 1093 aa20.02■□□□□ 0.8
HDGFL3-203ENST00000563404 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.79
HDGFL3-203ENST00000563404 FOXP2O15409 715 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 FAAP100Q0VG06 881 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 ACVR2BQ13705 512 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 KCNA10Q16322 511 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 ZMYM1Q5SVZ6 1142 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 ANKRD33Q7Z3H0 272 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 CDX2Q99626 313 aaPredicted RBP20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 TTYH1Q9H313 450 aaPredicted RBP20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 SEMA6BQ9H3T3 888 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 ZNF287Q9HBT7 754 aa20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.01■□□□□ 0.79
HDGFL3-203ENST00000563404 DUSP11O75319 330 aaKnown RBP20■□□□□ 0.79
HDGFL3-203ENST00000563404 BMP3P12645 472 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 OAZ1P54368 228 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 SMAD3P84022 425 aaKnown RBP20■□□□□ 0.79
HDGFL3-203ENST00000563404 TFAP4Q01664 338 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 PPARAQ07869 468 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 ANKRD35Q8N283 1001 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 CHST13Q8NET6 341 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 KATNBL1Q9H079 304 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 STARD7Q9NQZ5 370 aa20■□□□□ 0.79
HDGFL3-203ENST00000563404 CTDP1Q9Y5B0 961 aaPredicted RBP20■□□□□ 0.79
HDGFL3-203ENST00000563404 MOXD2PA6NHM9 499 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 TMEM232C9JQI7 657 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 TSPY3P0CV98 308 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 TSPY8P0CW00 308 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 RAG1P15918 1043 aa19.99■□□□□ 0.79
HDGFL3-203ENST00000563404 CNTN2Q02246 1040 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms