RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-205	ENST00000563293	MCMDC2	Q4G0Z9	681 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	SLC9C2	Q5TAH2	1124 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	KIAA1211	Q6ZU35	1233 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	NCAPG2	Q86XI2	1143 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	CLEC10A	Q8IUN9	316 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	MAGEB6	Q8N7X4	407 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	APPBP2	Q92624	585 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	TIFA	Q96CG3	184 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	NECAB3	Q96P71	396 aa	Predicted RBP	11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.22	□□□□□ -0.61	2e-6	■■□□□ 12.6
RPAP1-205	ENST00000563293	ESYT1	Q9BSJ8	1104 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	PBX4	Q9BYU1	374 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	EHD4	Q9H223	541 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	PRDM12	Q9H4Q4	367 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	XPNPEP3	Q9NQH7	507 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	TMEM39A	Q9NV64	488 aa		11.22	□□□□□ -0.61
RPAP1-205	ENST00000563293	COL11A1	P12107	1806 aa	Predicted RBP	11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	SMIM22	K7EJ46	135 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	DSG3	P32926	999 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	ADD2	P35612	726 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	GABPA	Q06546	454 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	ZMYM1	Q5SVZ6	1142 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	CWC27	Q6UX04	472 aa	Known RBP	11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	SPICE1	Q8N0Z3	855 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	SHCBP1	Q8NEM2	672 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	IL27	Q8NEV9	243 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	ADAMTS19	Q8TE59	1207 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	ATG4C	Q96DT6	458 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	ASB2	Q96Q27	587 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	TANGO6	Q9C0B7	1094 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	HOXC10	Q9NYD6	342 aa		11.21	□□□□□ -0.61
RPAP1-205	ENST00000563293	PARP14	Q460N5	1801 aa		11.21	□□□□□ -0.62
RPAP1-205	ENST00000563293	MYADML2	A6NDP7	307 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	SGSM2	O43147	1006 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	ACR	P10323	421 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	CYP2D6	P10635	497 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	PDE6A	P16499	860 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	GNAT2	P19087	354 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	PLA2G5	P39877	138 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	TMEM132B	Q14DG7	1078 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	TMEM240	Q5SV17	173 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	SLC44A5	Q8NCS7	719 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	CABP5	Q9NP86	173 aa		11.2	□□□□□ -0.62
RPAP1-205	ENST00000563293	TRANK1	O15050	2925 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	GBF1	Q92538	1859 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	MPHOSPH10	O00566	681 aa	Known RBP	11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	ADAMTS4	O75173	837 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	TIMP1	P01033	207 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	RARB	P10826	455 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	NMI	Q13287	307 aa	Predicted RBP	11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	RASIP1	Q5U651	963 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	ANKRD33	Q7Z3H0	272 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	RIOK1	Q9BRS2	568 aa	Known RBP	11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	MROH8	Q9H579	483 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	TBX21	Q9UL17	535 aa		11.19	□□□□□ -0.62
RPAP1-205	ENST00000563293	ZNF532	Q9HCE3	1301 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	TCRBV5S4A2T	A0A5A2	114 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	ADCY6	O43306	1168 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	FLOT1	O75955	427 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	FCER1A	P12319	257 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	CSF2RA	P15509	400 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	MCC	P23508	829 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	ACLY	P53396	1101 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	ZNF792	Q3KQV3	632 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	RNF180	Q86T96	592 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	TTC6	Q86TZ1	520 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	ABRA	Q8N0Z2	381 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	DYNLL2	Q96FJ2	89 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	TOX2	Q96NM4	488 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	UHRF1	Q96T88	793 aa	Predicted RBP	11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	TINF2	Q9BSI4	451 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	FBXO28	Q9NVF7	368 aa		11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.18	□□□□□ -0.62
RPAP1-205	ENST00000563293	CCDC171	Q6TFL3	1326 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	SYNRG	Q9UMZ2	1314 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	POLR3D	P05423	398 aa	Predicted RBP	11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	AKR1B1	P15121	316 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	TFF2	Q03403	129 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	KCNA10	Q16322	511 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	SLFNL1	Q499Z3	407 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	AKNAD1	Q5T1N1	836 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	MFSD5	Q6N075	450 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	CCDC129	Q6ZRS4	1044 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	ZNF365	Q70YC5	407 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	KLHDC9	Q8NEP7	349 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	FAM122A	Q96E09	287 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	FAM227B	Q96M60	508 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	MMP19	Q99542	508 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	DSCC1	Q9BVC3	393 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	STARD7	Q9NQZ5	370 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	SLC5A4	Q9NY91	659 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	THEG	Q9P2T0	379 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	CTNNA3	Q9UI47	895 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	ADAMTS5	Q9UNA0	930 aa		11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	YBX2	Q9Y2T7	364 aa	Known RBP	11.17	□□□□□ -0.62
RPAP1-205	ENST00000563293	NAV1	Q8NEY1	1877 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms