RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 ZFYP08048 801 aaPredicted RBP25.3■■□□□ 1.64
GGA2-204ENST00000563047 C9orf50Q5SZB4 431 aa25.3■■□□□ 1.64
GGA2-204ENST00000563047 PRPF38AQ8NAV1 312 aaKnown RBP25.3■■□□□ 1.64
GGA2-204ENST00000563047 LENG1Q96BZ8 264 aaPredicted RBP25.3■■□□□ 1.64
GGA2-204ENST00000563047 AKR1A1P14550 325 aa25.29■■□□□ 1.64
GGA2-204ENST00000563047 GNAT2P19087 354 aa25.29■■□□□ 1.64
GGA2-204ENST00000563047 TDO2P48775 406 aa25.29■■□□□ 1.64
GGA2-204ENST00000563047 TLE2Q04725 743 aa25.29■■□□□ 1.64
GGA2-204ENST00000563047 RNF180Q86T96 592 aa25.29■■□□□ 1.64
GGA2-204ENST00000563047 GUCD1Q96NT3 240 aa25.29■■□□□ 1.64
GGA2-204ENST00000563047 PATL2C9JE40 543 aaKnown RBP25.28■■□□□ 1.64
GGA2-204ENST00000563047 ATP2A1O14983 1001 aa25.28■■□□□ 1.64
GGA2-204ENST00000563047 ZNF444Q8N0Y2 327 aaPredicted RBP25.28■■□□□ 1.64
GGA2-204ENST00000563047 MKL1Q969V6 931 aa25.28■■□□□ 1.64
GGA2-204ENST00000563047 CEP95Q96GE4 821 aa25.28■■□□□ 1.64
GGA2-204ENST00000563047 MTMR4Q9NYA4 1195 aa25.28■■□□□ 1.64
GGA2-204ENST00000563047 CNPY2Q9Y2B0 182 aa25.28■■□□□ 1.64
GGA2-204ENST00000563047 DNAJC25-GNG10A0A024R161 153 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 A0A1W2PQ45 241 aaPredicted RBP25.27■■□□□ 1.64
GGA2-204ENST00000563047 A0A1W2PQY0 241 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 ADAMTS4O75173 837 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 SNAI1O95863 264 aaPredicted RBP25.27■■□□□ 1.64
GGA2-204ENST00000563047 APPP05067 770 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 ITGB8P26012 769 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 IFNL3Q8IZI9 196 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 CPXCR1Q8N123 301 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 MSL3Q8N5Y2 521 aaKnown RBP25.27■■□□□ 1.64
GGA2-204ENST00000563047 DDX11Q96FC9 970 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 FAM161BQ96MY7 647 aa25.27■■□□□ 1.64
GGA2-204ENST00000563047 ZBED4O75132 1171 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 SLC4A3P48751 1232 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 MAMDC4Q6UXC1 1216 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 KIFC2Q96AC6 838 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 SEC62Q99442 399 aaKnown RBP25.26■■□□□ 1.63
GGA2-204ENST00000563047 ZNF287Q9HBT7 754 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 RAVER2Q9HCJ3 691 aaKnown RBP25.26■■□□□ 1.63
GGA2-204ENST00000563047 TACC3Q9Y6A5 838 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 SYNGAP1Q96PV0 1343 aa25.26■■□□□ 1.63
GGA2-204ENST00000563047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.25■■□□□ 1.63
GGA2-204ENST00000563047 SLC38A10Q9HBR0 1119 aa25.25■■□□□ 1.63
GGA2-204ENST00000563047 TTC41PQ6P2S7 1318 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 SYNRGQ9UMZ2 1314 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 TTLL1O95922 423 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 CLTBP09497 229 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 ZNF697Q5TEC3 545 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 LRRC47Q8N1G4 583 aaKnown RBP25.24■■□□□ 1.63
GGA2-204ENST00000563047 GMCL1P1Q8NEA9 526 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 PI4K2BQ8TCG2 481 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 TSEN34Q9BSV6 310 aaKnown RBP25.24■■□□□ 1.63
GGA2-204ENST00000563047 FEM1BQ9UK73 627 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 FAM184BQ9ULE4 1060 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 SYNPO2Q9UMS6 1093 aa25.24■■□□□ 1.63
GGA2-204ENST00000563047 PLIN4Q96Q06 1357 aa25.23■■□□□ 1.63
GGA2-204ENST00000563047 LRRFIP1Q32MZ4 808 aaKnown RBP25.23■■□□□ 1.63
GGA2-204ENST00000563047 ZNF467Q7Z7K2 595 aaPredicted RBP25.23■■□□□ 1.63
GGA2-204ENST00000563047 KLHDC9Q8NEP7 349 aa25.23■■□□□ 1.63
GGA2-204ENST00000563047 NEDD1Q8NHV4 660 aa25.23■■□□□ 1.63
GGA2-204ENST00000563047 OTUD7AQ8TE49 926 aaPredicted RBP25.23■■□□□ 1.63
GGA2-204ENST00000563047 FGD4Q96M96 766 aa25.23■■□□□ 1.63
GGA2-204ENST00000563047 ZHX1Q9UKY1 873 aaPredicted RBP25.23■■□□□ 1.63
GGA2-204ENST00000563047 CTDP1Q9Y5B0 961 aaPredicted RBP25.23■■□□□ 1.63
GGA2-204ENST00000563047 PCDHB15Q9Y5E8 787 aa25.23■■□□□ 1.63
GGA2-204ENST00000563047 PQBP1O60828 265 aaKnown RBP25.22■■□□□ 1.63
GGA2-204ENST00000563047 ACLYP53396 1101 aa25.22■■□□□ 1.63
GGA2-204ENST00000563047 CCSAPQ6IQ19 270 aaPredicted RBP25.22■■□□□ 1.63
GGA2-204ENST00000563047 UNC80Q8N2C7 3258 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 KIAA0355O15063 1070 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 ERC2O15083 957 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 TSPY3P0CV98 308 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 TSPY8P0CW00 308 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 SLFN13Q68D06 897 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 NACAP1Q9BZK3 213 aa25.21■■□□□ 1.63
GGA2-204ENST00000563047 MYADML2A6NDP7 307 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 ADCY6O43306 1168 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 DUSP11O75319 330 aaKnown RBP25.2■■□□□ 1.62
GGA2-204ENST00000563047 BMP3P12645 472 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 OAZ1P54368 228 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 EPHB4P54760 987 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 IRX5P78411 483 aaPredicted RBP25.2■■□□□ 1.62
GGA2-204ENST00000563047 PDE4BQ07343 736 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 ACVR2BQ13705 512 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 KCNA10Q16322 511 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 ZMYM1Q5SVZ6 1142 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 ANKRD33Q7Z3H0 272 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 ANKRD35Q8N283 1001 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 CHST13Q8NET6 341 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 FSD1Q9BTV5 496 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 NAPBQ9H115 298 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 STARD7Q9NQZ5 370 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.2■■□□□ 1.62
GGA2-204ENST00000563047 FBXO40Q9UH90 709 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 MCM3APO60318 1980 aa25.2■■□□□ 1.62
GGA2-204ENST00000563047 MOXD2PA6NHM9 499 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 SMAD3P84022 425 aaKnown RBP25.19■■□□□ 1.62
GGA2-204ENST00000563047 TFAP4Q01664 338 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 PPARAQ07869 468 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 FAAP100Q0VG06 881 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 NUP133Q8WUM0 1156 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 TOX2Q96NM4 488 aa25.19■■□□□ 1.62
GGA2-204ENST00000563047 SEMA6BQ9H3T3 888 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms