RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 AKR1B15C9JRZ8 316 aaPredicted RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 ORC4O43929 436 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 PPFIA3O75145 1194 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 CAMTA2O94983 1202 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 CASQ1P31415 396 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 KIF5BP33176 963 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 TXLNAP40222 546 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 GNAQP50148 359 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 TOB1P50616 345 aaPredicted RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 SEC23AQ15436 765 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 Q3C1V9 767 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 ARL6IP4Q66PJ3 421 aaKnown RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 SPTY2D1Q68D10 685 aaPredicted RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 GALNT17Q6IS24 598 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 SYT10Q6XYQ8 523 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 RAB11FIP4Q86YS3 637 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 CNGA4Q8IV77 575 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 LCORLQ8N3X6 602 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 IQUBQ8NA54 791 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 PKNOX2Q96KN3 472 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 AIFM3Q96NN9 605 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 CLIC6Q96NY7 704 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 ABCA3Q99758 1704 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
CFDP1-202ENST00000562602 PHF20Q9BVI0 1012 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 ANKRD2Q9GZV1 360 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 HSD3B7Q9H2F3 369 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 SH3GLB2Q9NR46 395 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 ATP8A2Q9NTI2 1148 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 RAI14Q9P0K7 980 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 NFE2L3Q9Y4A8 694 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 TOGARAM1Q9Y4F4 1720 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 MYH3P11055 1940 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 TNKSO95271 1327 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 ITIH6Q6UXX5 1313 aa8.5□□□□□ -1.05
CFDP1-202ENST00000562602 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 NTSR2O95665 410 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 AVPP01185 164 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 CCDC175P0C221 793 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 ATP1A3P13637 1013 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 H2AFXP16104 143 aaPredicted RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 PPP1R2P41236 205 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 CRKLP46109 303 aaKnown RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 USP46P62068 366 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 CHRNDQ07001 517 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 PDE4BQ07343 736 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 NR1I3Q14994 352 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SLC10A5Q5PT55 438 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 TEX35Q5T0J7 233 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 INTS5Q6P9B9 1019 aaKnown RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 TMCO3Q6UWJ1 677 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SH3RF1Q7Z6J0 888 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SYNE4Q8N205 404 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 GPR161Q8N6U8 529 aaKnown RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 NUP133Q8WUM0 1156 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 ERCC4Q92889 916 aaPredicted RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SLC4A9Q96Q91 983 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 ARID3AQ99856 593 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 LZTS2Q9BRK4 669 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 CRNKL1Q9BZJ0 848 aaKnown RBP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 NYXQ9GZU5 481 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 CABP5Q9NP86 173 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 FAM53CQ9NYF3 392 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 MYO1AQ9UBC5 1043 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 NIP7Q9Y221 180 aaKnown RBP eCLIP8.49□□□□□ -1.05
CFDP1-202ENST00000562602 PPP2R2CQ9Y2T4 447 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 PLCH1Q4KWH8 1693 aa8.49□□□□□ -1.05
CFDP1-202ENST00000562602 A0A087WWV3 80 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 LOC102724428A0A0B4J2F2 783 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 LAD1O00515 517 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 RXRAP19793 462 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 LONP1P36776 959 aaKnown RBP8.48□□□□□ -1.05
CFDP1-202ENST00000562602 SIK1P57059 783 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 DDB1Q16531 1140 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 SBK1Q52WX2 424 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 TMTC3Q6ZXV5 915 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 TMTC1Q8IUR5 882 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 FOXP4Q8IVH2 680 aaPredicted RBP8.48□□□□□ -1.05
CFDP1-202ENST00000562602 REXO1L1PQ8IX06 675 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 AMOTL1Q8IY63 956 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 PDILTQ8N807 584 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
CFDP1-202ENST00000562602 NOC3LQ8WTT2 800 aaKnown RBP8.48□□□□□ -1.05
CFDP1-202ENST00000562602 IQCDQ96DY2 449 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
CFDP1-202ENST00000562602 CSRNP2Q9H175 543 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 MAGEF1Q9HAY2 307 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 SENP2Q9HC62 589 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 GJB4Q9NTQ9 266 aa8.48□□□□□ -1.05
CFDP1-202ENST00000562602 ARPP21Q9UBL0 812 aaPredicted RBP8.48□□□□□ -1.05
CFDP1-202ENST00000562602 TTF2Q9UNY4 1162 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms