RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SLC1A4P43007 532 aa28.14■■■□□ 2.1
CDR2-202ENST00000561630 TMEM232C9JQI7 657 aa28.13■■■□□ 2.09
CDR2-202ENST00000561630 FARP2O94887 1054 aaPredicted RBP28.13■■■□□ 2.09
CDR2-202ENST00000561630 SLC38A10Q9HBR0 1119 aa28.13■■■□□ 2.09
CDR2-202ENST00000561630 SLC5A4Q9NY91 659 aa28.13■■■□□ 2.09
CDR2-202ENST00000561630 CTNNA3Q9UI47 895 aa28.13■■■□□ 2.09
CDR2-202ENST00000561630 RAD50Q92878 1312 aa28.13■■■□□ 2.09
CDR2-202ENST00000561630 MYH4Q9Y623 1939 aa28.12■■■□□ 2.09
CDR2-202ENST00000561630 CHMLP26374 656 aa28.12■■■□□ 2.09
CDR2-202ENST00000561630 NT5C2P49902 561 aa28.12■■■□□ 2.09
CDR2-202ENST00000561630 STAT2P52630 851 aa28.12■■■□□ 2.09
CDR2-202ENST00000561630 OLFML2BQ68BL8 750 aa28.12■■■□□ 2.09
CDR2-202ENST00000561630 SNRNP48Q6IEG0 339 aaKnown RBP28.12■■■□□ 2.09
CDR2-202ENST00000561630 NEDD4P46934 1319 aa28.12■■■□□ 2.09
CDR2-202ENST00000561630 ZNF236Q9UL36 1845 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 PLA2G6O60733 806 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 FDX1P10109 184 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 TOP1P11387 765 aaKnown RBP28.11■■■□□ 2.09
CDR2-202ENST00000561630 CCND3P30281 292 aaPredicted RBP28.11■■■□□ 2.09
CDR2-202ENST00000561630 IMMTQ16891 758 aaKnown RBP28.11■■■□□ 2.09
CDR2-202ENST00000561630 RCSD1Q6JBY9 416 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 FAM160B2Q86V87 743 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 CHURC1Q8WUH1 139 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 RUFY2Q8WXA3 655 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 ESR2Q92731 530 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 MMP19Q99542 508 aa28.11■■■□□ 2.09
CDR2-202ENST00000561630 ISY1Q9ULR0 285 aaKnown RBP28.11■■■□□ 2.09
CDR2-202ENST00000561630 CTDP1Q9Y5B0 961 aaPredicted RBP28.11■■■□□ 2.09
CDR2-202ENST00000561630 CYP2C19P33261 490 aa28.1■■■□□ 2.09
CDR2-202ENST00000561630 OAZ1P54368 228 aa28.1■■■□□ 2.09
CDR2-202ENST00000561630 KCTD2Q14681 263 aa28.1■■■□□ 2.09
CDR2-202ENST00000561630 TTC14Q96N46 770 aa28.1■■■□□ 2.09
CDR2-202ENST00000561630 TMEM47Q9BQJ4 181 aa28.1■■■□□ 2.09
CDR2-202ENST00000561630 RIPK3Q9Y572 518 aa28.1■■■□□ 2.09
CDR2-202ENST00000561630 KCTD1Q719H9 257 aa28.09■■■□□ 2.09
CDR2-202ENST00000561630 CENPQQ7L2Z9 268 aaPredicted RBP28.09■■■□□ 2.09
CDR2-202ENST00000561630 CPXCR1Q8N123 301 aa28.09■■■□□ 2.09
CDR2-202ENST00000561630 ANKLE1Q8NAG6 615 aa28.09■■■□□ 2.09
CDR2-202ENST00000561630 CHMP4CQ96CF2 233 aa28.09■■■□□ 2.09
CDR2-202ENST00000561630 RAVER2Q9HCJ3 691 aaKnown RBP28.09■■■□□ 2.09
CDR2-202ENST00000561630 OGDHLQ9ULD0 1010 aa28.09■■■□□ 2.09
CDR2-202ENST00000561630 RASGRP2Q7LDG7 609 aa28.08■■■□□ 2.09
CDR2-202ENST00000561630 DCAF4Q8WV16 495 aa28.08■■■□□ 2.09
CDR2-202ENST00000561630 IKQ13123 557 aaPredicted RBP28.07■■■□□ 2.08
CDR2-202ENST00000561630 LHX8Q68G74 356 aa28.07■■■□□ 2.08
CDR2-202ENST00000561630 MAML3Q96JK9 1138 aa28.07■■■□□ 2.08
CDR2-202ENST00000561630 COL11A1P12107 1806 aaPredicted RBP28.06■■■□□ 2.08
CDR2-202ENST00000561630 PGK2P07205 417 aa28.06■■■□□ 2.08
CDR2-202ENST00000561630 HTATIP2Q9BUP3 242 aa28.06■■■□□ 2.08
CDR2-202ENST00000561630 MTMR7Q9Y216 660 aa28.06■■■□□ 2.08
CDR2-202ENST00000561630 DIS3Q9Y2L1 958 aaKnown RBP28.06■■■□□ 2.08
CDR2-202ENST00000561630 KDM4AO75164 1064 aa28.05■■■□□ 2.08
CDR2-202ENST00000561630 CYBAP13498 195 aa28.05■■■□□ 2.08
CDR2-202ENST00000561630 ZNF792Q3KQV3 632 aa28.05■■■□□ 2.08
CDR2-202ENST00000561630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.05■■■□□ 2.08
CDR2-202ENST00000561630 TRPV1Q8NER1 839 aa28.05■■■□□ 2.08
CDR2-202ENST00000561630 PAWRQ96IZ0 340 aaKnown RBP28.05■■■□□ 2.08
CDR2-202ENST00000561630 SGSM2O43147 1006 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 SLC4A3P48751 1232 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 MNX1P50219 401 aaPredicted RBP28.04■■■□□ 2.08
CDR2-202ENST00000561630 CCDC96Q2M329 555 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 NECAB2Q7Z6G3 386 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 DGKHQ86XP1 1220 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 DIS3LQ8TF46 1054 aaKnown RBP28.04■■■□□ 2.08
CDR2-202ENST00000561630 FBXO40Q9UH90 709 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 PRR12Q9ULL5 1215 aa28.04■■■□□ 2.08
CDR2-202ENST00000561630 ZNF536O15090 1300 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 B4E1Z4 1266 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 CCDC178Q5BJE1 867 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 IQCA1Q86XH1 822 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 CHST13Q8NET6 341 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 ZKSCAN3Q9BRR0 538 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 KRT23Q9C075 422 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 CNNM2Q9H8M5 875 aa28.03■■■□□ 2.08
CDR2-202ENST00000561630 DDX20Q9UHI6 824 aaKnown RBP28.03■■■□□ 2.08
CDR2-202ENST00000561630 MSCO60682 206 aa28.02■■■□□ 2.08
CDR2-202ENST00000561630 PDHBP11177 359 aa28.02■■■□□ 2.08
CDR2-202ENST00000561630 CNGA1P29973 690 aa28.02■■■□□ 2.08
CDR2-202ENST00000561630 PTH1RQ03431 593 aa28.02■■■□□ 2.08
CDR2-202ENST00000561630 BTNL9Q6UXG8 535 aa28.02■■■□□ 2.08
CDR2-202ENST00000561630 DPF3Q92784 378 aa28.02■■■□□ 2.08
CDR2-202ENST00000561630 DNAJC25-GNG10A0A024R161 153 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 SNHG28P0DPA3 235 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 TTBK2Q6IQ55 1244 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 ANKS1AQ92625 1134 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 DDX11Q96FC9 970 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 AGBL1Q96MI9 1066 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 TINF2Q9BSI4 451 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 ZSWIM5Q9P217 1185 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 LAMA4Q16363 1823 aa28.01■■■□□ 2.07
CDR2-202ENST00000561630 ZSCAN10Q96SZ4 725 aaPredicted RBP28■■■□□ 2.07
CDR2-202ENST00000561630 NRBP1Q9UHY1 535 aa28■■■□□ 2.07
CDR2-202ENST00000561630 U3KPZ7 1027 aaPredicted RBP28■■■□□ 2.07
CDR2-202ENST00000561630 SLC16A2P36021 539 aa27.99■■■□□ 2.07
CDR2-202ENST00000561630 ZNF543Q08ER8 600 aa27.99■■■□□ 2.07
CDR2-202ENST00000561630 TKFCQ3LXA3 575 aa27.99■■■□□ 2.07
CDR2-202ENST00000561630 ANKRD35Q8N283 1001 aa27.99■■■□□ 2.07
CDR2-202ENST00000561630 HOMER2Q9NSB8 354 aa27.99■■■□□ 2.07
CDR2-202ENST00000561630 CEP290O15078 2479 aa27.99■■■□□ 2.07
CDR2-202ENST00000561630 FRMPD2Q68DX3 1309 aaPredicted RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms