RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 FBXO28Q9NVF7 368 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 PHF24Q9UPV7 400 aa12.81□□□□□ -0.36
TPM1-227ENST00000560970 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 VWA5AO00534 786 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 RAD21O60216 631 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 AKR1A1P14550 325 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 PRAMEF19Q5SWL8 479 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 FAM83BQ5T0W9 1011 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 SEC62Q99442 399 aaKnown RBP12.8□□□□□ -0.36
TPM1-227ENST00000560970 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 OSBPL3Q9H4L5 887 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 DIS3Q9Y2L1 958 aaKnown RBP12.8□□□□□ -0.36
TPM1-227ENST00000560970 PLIN4Q96Q06 1357 aa12.8□□□□□ -0.36
TPM1-227ENST00000560970 VCANP13611 3396 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 PGK2P07205 417 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 ZNF792Q3KQV3 632 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 C9orf50Q5SZB4 431 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 RNF180Q86T96 592 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
TPM1-227ENST00000560970 BADQ92934 168 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
TPM1-227ENST00000560970 A0A1W2PQ45 241 aaPredicted RBP12.78□□□□□ -0.36
TPM1-227ENST00000560970 A0A1W2PQY0 241 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 GPAA1O43292 621 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 ZFYP08048 801 aaPredicted RBP12.78□□□□□ -0.36
TPM1-227ENST00000560970 CLTBP09497 229 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 RASA1P20936 1047 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 STAT3P40763 770 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 SHHQ15465 462 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 ZMYM1Q5SVZ6 1142 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 SKAP1Q86WV1 359 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 MSL3Q8N5Y2 521 aaKnown RBP12.78□□□□□ -0.36
TPM1-227ENST00000560970 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
TPM1-227ENST00000560970 EVI5LQ96CN4 794 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 FAM161BQ96MY7 647 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
TPM1-227ENST00000560970 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
TPM1-227ENST00000560970 EPB41L4AQ9HCS5 686 aaPredicted RBP12.78□□□□□ -0.36
TPM1-227ENST00000560970 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 SYNGAP1Q96PV0 1343 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
TPM1-227ENST00000560970 SPTBN5Q9NRC6 3674 aaKnown RBP12.77□□□□□ -0.36
TPM1-227ENST00000560970 ADAMTS4O75173 837 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 NDUFB10O96000 172 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 PGK1P00558 417 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
TPM1-227ENST00000560970 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
TPM1-227ENST00000560970 SMAD3P84022 425 aaKnown RBP12.77□□□□□ -0.37
TPM1-227ENST00000560970 TLE2Q04725 743 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 SBK1Q52WX2 424 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 SNRNP48Q6IEG0 339 aaKnown RBP12.77□□□□□ -0.37
TPM1-227ENST00000560970 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.37
TPM1-227ENST00000560970 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
TPM1-227ENST00000560970 MYH6P13533 1939 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 A0A0D9SFI3 127 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 FOXP2O15409 715 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
TPM1-227ENST00000560970 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
TPM1-227ENST00000560970 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 TRIM43Q96BQ3 446 aaPredicted RBP12.76□□□□□ -0.37
TPM1-227ENST00000560970 RNPC3Q96LT9 517 aaKnown RBP12.76□□□□□ -0.37
TPM1-227ENST00000560970 FAM227BQ96M60 508 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 NYAP2Q9P242 653 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 SYNPO2Q9UMS6 1093 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 TACC3Q9Y6A5 838 aa12.76□□□□□ -0.37
TPM1-227ENST00000560970 DNAJC25-GNG10A0A024R161 153 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 TMEM265A0A087WTH1 108 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 MOXD2PA6NHM9 499 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 TDO2P48775 406 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 TTC22Q5TAA0 569 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 MROH7Q68CQ1 1323 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
TPM1-227ENST00000560970 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
TPM1-227ENST00000560970 TSEN34Q9BSV6 310 aaKnown RBP12.75□□□□□ -0.37
TPM1-227ENST00000560970 MKNK2Q9HBH9 465 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 STARD7Q9NQZ5 370 aa12.75□□□□□ -0.37
TPM1-227ENST00000560970 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
TPM1-227ENST00000560970 IGKV6D-41A0A0C4DH26 115 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 F5H6K3 240 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 RAG1P15918 1043 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 GNAT2P19087 354 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 ITGB8P26012 769 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 CST5P28325 142 aaPredicted RBP12.74□□□□□ -0.37
TPM1-227ENST00000560970 ACLYP53396 1101 aa12.74□□□□□ -0.37
TPM1-227ENST00000560970 FPGSQ05932 587 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms