RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 PTPRCP08575 1304 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 MPHOSPH10O00566 681 aaKnown RBP11.67□□□□□ -0.54
HERC1-210ENST00000560897 CD4P01730 458 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 UBTFL1P0CB47 393 aaPredicted RBP11.67□□□□□ -0.54
HERC1-210ENST00000560897 KCNA5P22460 613 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 USP5P45974 858 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 PPP4CP60510 307 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 DDX10Q13206 875 aaKnown RBP11.67□□□□□ -0.54
HERC1-210ENST00000560897 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
HERC1-210ENST00000560897 LEXMQ3ZCV2 418 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 PTCRAQ6ISU1 281 aaPredicted RBP11.67□□□□□ -0.54
HERC1-210ENST00000560897 TTC6Q86TZ1 520 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 ATG4CQ96DT6 458 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
HERC1-210ENST00000560897 UMODL1Q5DID0 1318 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 COL4A4P53420 1690 aaPredicted RBP11.66□□□□□ -0.54
HERC1-210ENST00000560897 GFRA3O60609 400 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 CABYRO75952 493 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 UQCRFS1P1P0C7P4 283 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 IL9P15248 144 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 TAP1Q03518 808 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 PRRX2Q99811 253 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 NOC4LQ9BVI4 516 aaKnown RBP11.66□□□□□ -0.54
HERC1-210ENST00000560897 SEZ6LQ9BYH1 1024 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 EHD4Q9H223 541 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 LMCD1Q9NZU5 365 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 FAM50BQ9Y247 325 aa11.66□□□□□ -0.54
HERC1-210ENST00000560897 SALL2Q9Y467 1007 aaPredicted RBP11.66□□□□□ -0.54
HERC1-210ENST00000560897 GJA9P57773 515 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 TTLL4Q14679 1199 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 TMEM132BQ14DG7 1078 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 SEPT2Q15019 361 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 HFE2Q6ZVN8 426 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 NOL8Q76FK4 1167 aaKnown RBP11.65□□□□□ -0.54
HERC1-210ENST00000560897 DEFB128Q7Z7B8 93 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 RIOX2Q8IUF8 465 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 DDX11Q96FC9 970 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 SCLYQ96I15 445 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
HERC1-210ENST00000560897 WNT8AQ9H1J5 351 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 PRKRIP1Q9H875 184 aaPredicted RBP11.65□□□□□ -0.54
HERC1-210ENST00000560897 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
HERC1-210ENST00000560897 ZEB2O60315 1214 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 ARID4AP29374 1257 aaPredicted RBP11.64□□□□□ -0.55
HERC1-210ENST00000560897 STAT3P40763 770 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 MCAMP43121 646 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 TFCP2Q12800 502 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 ACVR2BQ13705 512 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 GDPD5Q8WTR4 605 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
HERC1-210ENST00000560897 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
HERC1-210ENST00000560897 COL11A1P12107 1806 aaPredicted RBP11.64□□□□□ -0.55
HERC1-210ENST00000560897 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
HERC1-210ENST00000560897 CXCL17Q6UXB2 119 aa11.63□□□□□ -0.55
HERC1-210ENST00000560897 HERC6Q8IVU3 1022 aa11.63□□□□□ -0.55
HERC1-210ENST00000560897 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
HERC1-210ENST00000560897 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.63□□□□□ -0.55
HERC1-210ENST00000560897 ABHD16BQ9H3Z7 469 aa11.63□□□□□ -0.55
HERC1-210ENST00000560897 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
HERC1-210ENST00000560897 USP34Q70CQ2 3546 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.62□□□□□ -0.55
HERC1-210ENST00000560897 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 GRXCR2A6NFK2 248 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
HERC1-210ENST00000560897 B4GALT4O60513 344 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 LPXNO60711 386 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 SNAI1O95863 264 aaPredicted RBP11.62□□□□□ -0.55
HERC1-210ENST00000560897 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
HERC1-210ENST00000560897 SHMT1P34896 483 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 KCNJ6P48051 423 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 DYNLL1P63167 89 aaKnown RBP11.62□□□□□ -0.55
HERC1-210ENST00000560897 BEX3Q00994 111 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 TTC39AQ5SRH9 613 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 MAMDC4Q6UXC1 1216 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.55
HERC1-210ENST00000560897 TRPV6Q9H1D0 765 aa11.62□□□□□ -0.55
HERC1-210ENST00000560897 PARP14Q460N5 1801 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 IGSF3O75054 1194 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 CYP7A1P22680 504 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 GUCY1A2P33402 732 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 RFC2P35250 354 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 PKN1Q16512 942 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
HERC1-210ENST00000560897 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
HERC1-210ENST00000560897 SLC43A3Q8NBI5 491 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 PRSS33Q8NF86 280 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 CRBNQ96SW2 442 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 ZBED2Q9BTP6 218 aa11.61□□□□□ -0.55
HERC1-210ENST00000560897 SNRKQ9NRH2 765 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms