RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 SMAD3P84022 425 aaKnown RBP7.85□□□□□ -1.15
USP8-213ENST00000560885 INSM1Q01101 510 aaPredicted RBP7.85□□□□□ -1.15
USP8-213ENST00000560885 ZYXQ15942 572 aaKnown RBP7.85□□□□□ -1.15
USP8-213ENST00000560885 WDR78Q5VTH9 848 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 C1orf53Q5VUE5 145 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 TMED8Q6PL24 325 aaPredicted RBP7.85□□□□□ -1.15
USP8-213ENST00000560885 SLC39A5Q6ZMH5 540 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 EHD4Q9H223 541 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 SEMA6BQ9H3T3 888 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 SNRKQ9NRH2 765 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 BTBD7Q9P203 1132 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 SAP30BPQ9UHR5 308 aaKnown RBP7.85□□□□□ -1.15
USP8-213ENST00000560885 SERPINB13Q9UIV8 391 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 ATP11BQ9Y2G3 1177 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 NDUFB9Q9Y6M9 179 aa7.85□□□□□ -1.15
USP8-213ENST00000560885 COL11A1P12107 1806 aaPredicted RBP7.85□□□□□ -1.15
USP8-213ENST00000560885 PNMA6EA0A0J9YXQ4 647 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 TNFRSF10AO00220 468 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 ACTN4O43707 911 aaKnown RBP7.84□□□□□ -1.15
USP8-213ENST00000560885 TLL1O43897 1013 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 S1PR4O95977 384 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 RARSP54136 660 aaKnown RBP7.84□□□□□ -1.15
USP8-213ENST00000560885 SNX17Q15036 470 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 RAB3GAP1Q15042 981 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 SHHQ15465 462 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 E2F4Q16254 413 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 ABCB5Q2M3G0 1257 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 CERKLQ49MI3 558 aaPredicted RBP7.84□□□□□ -1.15
USP8-213ENST00000560885 OLFML2BQ68BL8 750 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 DPP9Q86TI2 863 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 TTC6Q86TZ1 520 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 TRPV1Q8NER1 839 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 MAFAQ8NHW3 353 aaPredicted RBP7.84□□□□□ -1.15
USP8-213ENST00000560885 NPLOC4Q8TAT6 608 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 SYMPKQ92797 1274 aaKnown RBP7.84□□□□□ -1.15
USP8-213ENST00000560885 CABP5Q9NP86 173 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 PRDM6Q9NQX0 595 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 HOXC10Q9NYD6 342 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 XIRP2A4UGR9 3374 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 SMCHD1A6NHR9 2005 aa7.84□□□□□ -1.15
USP8-213ENST00000560885 TMEM265A0A087WTH1 108 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 IPO8O15397 1037 aaKnown RBP7.83□□□□□ -1.16
USP8-213ENST00000560885 ST8SIA5O15466 376 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 SEPT4O43236 478 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 AVPP01185 164 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 CYP7A1P22680 504 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 ADORA2AP29274 412 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 ZAP70P43403 619 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 USP5P45974 858 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 DYNLL1P63167 89 aaKnown RBP7.83□□□□□ -1.16
USP8-213ENST00000560885 COG2Q14746 738 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 TNNI3KQ59H18 835 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 C9orf50Q5SZB4 431 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 GJC2Q5T442 439 aaPredicted RBP7.83□□□□□ -1.16
USP8-213ENST00000560885 SHCBP1Q8NEM2 672 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 BADQ92934 168 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 DBNDD2Q9BQY9 259 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 RPAP3Q9H6T3 665 aaPredicted RBP7.83□□□□□ -1.16
USP8-213ENST00000560885 PRDM5Q9NQX1 630 aaPredicted RBP7.83□□□□□ -1.16
USP8-213ENST00000560885 SLC5A4Q9NY91 659 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 FPGT-TNNI3KV9GXZ4 949 aa7.83□□□□□ -1.16
USP8-213ENST00000560885 IDH1O75874 414 aaKnown RBP7.82□□□□□ -1.16
USP8-213ENST00000560885 TRIM27P14373 513 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 FOSL2P15408 326 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 DNAJB2P25686 324 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 SHMT1P34896 483 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 ADCYAP1R1P41586 468 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 CTC1Q2NKJ3 1217 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 ABRAQ8N0Z2 381 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 MB21D1Q8N884 522 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 ACER1Q8TDN7 264 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 SSH3Q8TE77 659 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 MYLIPQ8WY64 445 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 TTC28Q96AY4 2481 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 MOV10L1Q9BXT6 1211 aaKnown RBP7.82□□□□□ -1.16
USP8-213ENST00000560885 SPATC1LQ9H0A9 340 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 TTYH1Q9H313 450 aaPredicted RBP7.82□□□□□ -1.16
USP8-213ENST00000560885 MROH8Q9H579 483 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 PIH1D3Q9NQM4 214 aaKnown RBP7.82□□□□□ -1.16
USP8-213ENST00000560885 NPDC1Q9NQX5 325 aaPredicted RBP7.82□□□□□ -1.16
USP8-213ENST00000560885 PDLIM7Q9NR12 457 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 TACC3Q9Y6A5 838 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 CHD7Q9P2D1 2997 aa7.82□□□□□ -1.16
USP8-213ENST00000560885 TRIM43BA6NCK2 446 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 NR1I2O75469 434 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 ERCC3P19447 782 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 PLCD1P51178 756 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 MAP3K12Q12852 859 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 OS9Q13438 667 aaPredicted RBP7.81□□□□□ -1.16
USP8-213ENST00000560885 LRRC41Q15345 812 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 TRIM60Q495X7 471 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 SH3RF1Q7Z6J0 888 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 MIGA1Q8NAN2 632 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 TRIM43Q96BQ3 446 aaPredicted RBP7.81□□□□□ -1.16
USP8-213ENST00000560885 TANGO6Q9C0B7 1094 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 NRBP1Q9UHY1 535 aa7.81□□□□□ -1.16
USP8-213ENST00000560885 BAZ2AQ9UIF9 1905 aaKnown RBP7.8□□□□□ -1.16
USP8-213ENST00000560885 COBLO75128 1261 aa7.8□□□□□ -1.16
USP8-213ENST00000560885 SURF6O75683 361 aaKnown RBP7.8□□□□□ -1.16
USP8-213ENST00000560885 CLTBP09497 229 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms