RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 SMARCC2Q8TAQ2 1214 aa9.38□□□□□ -0.91
CPNE6-218ENST00000560845 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
CPNE6-218ENST00000560845 MYL10Q9BUA6 226 aa9.38□□□□□ -0.91
CPNE6-218ENST00000560845 TRIM34Q9BYJ4 488 aa9.38□□□□□ -0.91
CPNE6-218ENST00000560845 TAOK2Q9UL54 1235 aa9.38□□□□□ -0.91
CPNE6-218ENST00000560845 SLC45A1Q9Y2W3 748 aa9.38□□□□□ -0.91
CPNE6-218ENST00000560845 DDTLA6NHG4 134 aaPredicted RBP9.37□□□□□ -0.91
CPNE6-218ENST00000560845 SOX1O00570 391 aaPredicted RBP9.37□□□□□ -0.91
CPNE6-218ENST00000560845 NMT2O60551 498 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 CTDNEP1O95476 244 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 BRD1O95696 1058 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 TFRCP02786 760 aaKnown RBP9.37□□□□□ -0.91
CPNE6-218ENST00000560845 SHMT1P34896 483 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 RTN1Q16799 776 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 CCDC144CPQ8IYA2 1237 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 FAM184AQ8NB25 1140 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 SLC17A8Q8NDX2 589 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 SMCR8Q8TEV9 937 aaPredicted RBP9.37□□□□□ -0.91
CPNE6-218ENST00000560845 NUP133Q8WUM0 1156 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 DEFB118Q96PH6 123 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 GBP4Q96PP9 640 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 PAK6Q9NQU5 681 aaPredicted RBP9.37□□□□□ -0.91
CPNE6-218ENST00000560845 TCP11L1Q9NUJ3 509 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 PI4KBQ9UBF8 816 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 AFG3L2Q9Y4W6 797 aa9.37□□□□□ -0.91
CPNE6-218ENST00000560845 SIPA1L1O43166 1804 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 COL6A3P12111 3177 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 CCDC196A0A1B0GTZ2 297 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 VPS37CA5D8V6 355 aaPredicted RBP9.36□□□□□ -0.91
CPNE6-218ENST00000560845 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 STX6O43752 255 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 DTNBO60941 627 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 CALM1P0DP23 149 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 CALM2P0DP24 149 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 CALM3P0DP25 149 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
CPNE6-218ENST00000560845 CAPN2P17655 700 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 SYT1P21579 422 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 FOXD4L5Q5VV16 416 aaPredicted RBP9.36□□□□□ -0.91
CPNE6-218ENST00000560845 DGKHQ86XP1 1220 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 NEDD1Q8NHV4 660 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 FOXD4L4Q8WXT5 416 aaPredicted RBP9.36□□□□□ -0.91
CPNE6-218ENST00000560845 ANKS1AQ92625 1134 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 LRCH3Q96II8 777 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 DNAJC18Q9H819 358 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 KAT14Q9H8E8 782 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.36□□□□□ -0.91
CPNE6-218ENST00000560845 AGTPBP1Q9UPW5 1226 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 A0A0C4DFX4 3053 aa9.36□□□□□ -0.91
CPNE6-218ENST00000560845 STK36Q9NRP7 1315 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 DLL1O00548 723 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 CTNND1O60716 968 aaKnown RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 ZSCAN22P10073 491 aaPredicted RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 XRCC6P12956 609 aaKnown RBP eCLIP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 AKR1B1P15121 316 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 CDC27P30260 824 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 FAM110CQ1W6H9 321 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 FOXP4Q8IVH2 680 aaPredicted RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 ANKRD13CQ8N6S4 541 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 CTCFLQ8NI51 663 aaPredicted RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 DIS3LQ8TF46 1054 aaKnown RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 COA7Q96BR5 231 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 CCDC17Q96LX7 622 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 GZF1Q9H116 711 aaPredicted RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 RBM28Q9NW13 759 aaKnown RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
CPNE6-218ENST00000560845 STX8Q9UNK0 236 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 MTMR6Q9Y217 621 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 CUL9Q8IWT3 2517 aa9.35□□□□□ -0.91
CPNE6-218ENST00000560845 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 FAM196BA6NMK8 535 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 H3BQV1 296 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 MPHOSPH10O00566 681 aaKnown RBP9.34□□□□□ -0.91
CPNE6-218ENST00000560845 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 TOP1P11387 765 aaKnown RBP9.34□□□□□ -0.91
CPNE6-218ENST00000560845 PTMSP20962 102 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 KIF5BP33176 963 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 ADD1P35611 737 aaKnown RBP9.34□□□□□ -0.91
CPNE6-218ENST00000560845 FOSBP53539 338 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 TROAPQ12815 778 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 PPP2R5BQ15173 497 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 PPP4R3BQ5MIZ7 849 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
CPNE6-218ENST00000560845 NECAB2Q7Z6G3 386 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
CPNE6-218ENST00000560845 GAS2L3Q86XJ1 694 aa9.34□□□□□ -0.91
CPNE6-218ENST00000560845 TRIM22Q8IYM9 498 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms