RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 SPAG1Q07617 926 aa27.78■■■□□ 2.04
SHF-207ENST00000560540 LONRF2Q1L5Z9 754 aa27.78■■■□□ 2.04
SHF-207ENST00000560540 IFIT1BQ5T764 474 aaKnown RBP27.78■■■□□ 2.04
SHF-207ENST00000560540 ADGRA1Q86SQ6 560 aa27.78■■■□□ 2.04
SHF-207ENST00000560540 TMTC1Q8IUR5 882 aa27.78■■■□□ 2.04
SHF-207ENST00000560540 MSANTD4Q8NCY6 345 aa27.78■■■□□ 2.04
SHF-207ENST00000560540 RBM17Q96I25 401 aaKnown RBP27.78■■■□□ 2.04
SHF-207ENST00000560540 ATF5Q9Y2D1 282 aaPredicted RBP27.78■■■□□ 2.04
SHF-207ENST00000560540 ZNF804BA4D1E1 1349 aa27.78■■■□□ 2.04
SHF-207ENST00000560540 SRGNP10124 158 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 TRIM14Q14142 442 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 COL11A2P13942 1736 aaPredicted RBP27.77■■■□□ 2.04
SHF-207ENST00000560540 LRRC10BA6NIK2 292 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 MAP2K7O14733 419 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 CASP1P29466 404 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 USP5P45974 858 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 NPY5RQ15761 445 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 E2F4Q16254 413 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 MSL3Q8N5Y2 521 aaKnown RBP27.77■■■□□ 2.04
SHF-207ENST00000560540 CPLX3Q8WVH0 158 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 RAB21Q9UL25 225 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 CTNND2Q9UQB3 1225 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 XDHP47989 1333 aa27.77■■■□□ 2.04
SHF-207ENST00000560540 FGRP09769 529 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 PDE6BP35913 854 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 GPS2Q13227 327 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 MYO1AQ9UBC5 1043 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 RWDD2AQ9UIY3 292 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 V9GY48 417 aaPredicted RBP27.76■■■□□ 2.03
SHF-207ENST00000560540 CTAGE9A4FU28 777 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 WNT7AO00755 349 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 PRDM1O75626 825 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 PLEKHA8P1O95397 391 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 TRAPPC10P48553 1259 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 FXR1P51114 621 aaKnown RBP eCLIP27.76■■■□□ 2.03
SHF-207ENST00000560540 TROAPQ12815 778 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 TMTC3Q6ZXV5 915 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 IQCA1Q86XH1 822 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 SMYD4Q8IYR2 804 aaPredicted RBP27.76■■■□□ 2.03
SHF-207ENST00000560540 IQUBQ8NA54 791 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 RIOK1Q9BRS2 568 aaKnown RBP27.76■■■□□ 2.03
SHF-207ENST00000560540 ANKZF1Q9H8Y5 726 aa27.76■■■□□ 2.03
SHF-207ENST00000560540 ZNF569Q5MCW4 686 aa27.75■■■□□ 2.03
SHF-207ENST00000560540 CNTNAP5Q8WYK1 1306 aa27.75■■■□□ 2.03
SHF-207ENST00000560540 KRT31Q15323 416 aa27.74■■■□□ 2.03
SHF-207ENST00000560540 ZNF174Q15697 407 aa27.74■■■□□ 2.03
SHF-207ENST00000560540 PDXDC2PQ6P474 469 aa27.74■■■□□ 2.03
SHF-207ENST00000560540 CRAMP1Q96RY5 1269 aa27.74■■■□□ 2.03
SHF-207ENST00000560540 ABHD10Q9NUJ1 306 aa27.74■■■□□ 2.03
SHF-207ENST00000560540 GTPBP6O43824 516 aaPredicted RBP27.73■■■□□ 2.03
SHF-207ENST00000560540 PTGDRQ13258 359 aa27.73■■■□□ 2.03
SHF-207ENST00000560540 COL1A1P02452 1464 aaPredicted RBP27.73■■■□□ 2.03
SHF-207ENST00000560540 A0A0U1RQJ8 604 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 CHRNA5P30532 468 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 WHAMMP3Q1A5X7 153 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 KIF4BQ2VIQ3 1234 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 CYP26C1Q6V0L0 522 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 ANKRD20A12PQ8NF67 263 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 ATRIPQ8WXE1 791 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 NPR1P16066 1061 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 PAK1Q13153 545 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 C2CD5Q86YS7 1000 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 MTFR1LQ9H019 292 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 GNL3LQ9NVN8 582 aaKnown RBP27.72■■■□□ 2.03
SHF-207ENST00000560540 RMND1Q9NWS8 449 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 PSD3Q9NYI0 1048 aa27.72■■■□□ 2.03
SHF-207ENST00000560540 N4BP3O15049 544 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 ERLIN1O75477 346 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 COPB1P53618 953 aaKnown RBP27.71■■■□□ 2.03
SHF-207ENST00000560540 ERVK-24P63145 666 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 MUM1L1Q5H9M0 696 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 SLC35F6Q8N357 371 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 NAPGQ99747 312 aaPredicted RBP27.71■■■□□ 2.03
SHF-207ENST00000560540 PUF60Q9UHX1 559 aaKnown RBP27.71■■■□□ 2.03
SHF-207ENST00000560540 hCG_1642624A0A1W2PR95 340 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 CCT6AP40227 531 aaKnown RBP27.71■■■□□ 2.03
SHF-207ENST00000560540 HNRNPH2P55795 449 aaKnown RBP27.71■■■□□ 2.03
SHF-207ENST00000560540 BEND6Q5SZJ8 279 aaPredicted RBP27.71■■■□□ 2.03
SHF-207ENST00000560540 RRAGBQ5VZM2 374 aa27.71■■■□□ 2.03
SHF-207ENST00000560540 TUBBP07437 444 aa27.7■■■□□ 2.02
SHF-207ENST00000560540 ZNF658Q5TYW1 1059 aaPredicted RBP27.7■■■□□ 2.02
SHF-207ENST00000560540 ACRBPQ8NEB7 543 aa27.7■■■□□ 2.02
SHF-207ENST00000560540 EXOC4Q96A65 974 aa27.7■■■□□ 2.02
SHF-207ENST00000560540 MASTLQ96GX5 879 aa27.7■■■□□ 2.02
SHF-207ENST00000560540 ZSWIM4Q9H7M6 989 aa27.7■■■□□ 2.02
SHF-207ENST00000560540 ABCF2Q9UG63 623 aa27.7■■■□□ 2.02
SHF-207ENST00000560540 BBOX1O75936 387 aa27.69■■■□□ 2.02
SHF-207ENST00000560540 TCP11X2Q5H9J9 407 aa27.69■■■□□ 2.02
SHF-207ENST00000560540 ZNF622Q969S3 477 aaKnown RBP eCLIP27.69■■■□□ 2.02
SHF-207ENST00000560540 ZCCHC17Q9NP64 241 aaKnown RBP27.69■■■□□ 2.02
SHF-207ENST00000560540 C10orf71Q711Q0 1435 aa27.69■■■□□ 2.02
SHF-207ENST00000560540 SMIM22K7EJ46 135 aa27.69■■■□□ 2.02
SHF-207ENST00000560540 KLRK1P26718 216 aa27.69■■■□□ 2.02
SHF-207ENST00000560540 NOM1Q5C9Z4 860 aaKnown RBP27.69■■■□□ 2.02
SHF-207ENST00000560540 HDXQ7Z353 690 aa27.69■■■□□ 2.02
SHF-207ENST00000560540 IQSEC3Q9UPP2 1182 aaPredicted RBP27.69■■■□□ 2.02
SHF-207ENST00000560540 H0YIN7 160 aa27.68■■■□□ 2.02
SHF-207ENST00000560540 ARHGAP25P42331 645 aa27.68■■■□□ 2.02
SHF-207ENST00000560540 NEK11Q8NG66 645 aa27.68■■■□□ 2.02
SHF-207ENST00000560540 CTCFLQ8NI51 663 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms