RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
RABGGTA-213ENST00000560127 FBXO28Q9NVF7 368 aa15.54■□□□□ 0.08
RABGGTA-213ENST00000560127 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
RABGGTA-213ENST00000560127 SYNGAP1Q96PV0 1343 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 ARVCFO00192 962 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 DUSP11O75319 330 aaKnown RBP15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 TRIM27P14373 513 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 TFF2Q03403 129 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 ICA1Q05084 483 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 FAM126BQ8IXS8 530 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 REPS2Q8NFH8 660 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 SLC28A3Q9HAS3 691 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 IL23AQ9NPF7 189 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
RABGGTA-213ENST00000560127 LRRC37A2A6NM11 1700 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 SCN5AQ14524 2016 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 VWA5AO00534 786 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 ADCY6O43306 1168 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 BCAR3O75815 825 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 ASGR1P07306 291 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 CYP2C18P33260 490 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 ATP8B2P98198 1209 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 MSL3Q8N5Y2 521 aaKnown RBP15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 SDR42E1Q8WUS8 393 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 DYNLL2Q96FJ2 89 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 CRNKL1Q9BZJ0 848 aaKnown RBP15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 TSPYL2Q9H2G4 693 aaPredicted RBP15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 SH2D4AQ9H788 454 aa15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 DCP1AQ9NPI6 582 aaPredicted RBP15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 ARIH1Q9Y4X5 557 aaPredicted RBP15.52■□□□□ 0.08
RABGGTA-213ENST00000560127 MYH4Q9Y623 1939 aa15.52■□□□□ 0.07
RABGGTA-213ENST00000560127 MYH7P12883 1935 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 GREB1LQ9C091 1923 aaPredicted RBP15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 A0A0U1RQG5 324 aaPredicted RBP15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 APBB1O00213 710 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 C6orf222P0C671 652 aaPredicted RBP15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 KCNQ1P51787 676 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 MAMDC4Q6UXC1 1216 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 PCSK9Q8NBP7 692 aaKnown RBP15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 VTI1AQ96AJ9 217 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 LRFN3Q9BTN0 628 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 UPF3AQ9H1J1 476 aaKnown RBP15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 EPHX3Q9H6B9 360 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 SWAP70Q9UH65 585 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 PPP1R9AQ9ULJ8 1098 aa15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 NOP58Q9Y2X3 529 aaKnown RBP15.51■□□□□ 0.07
RABGGTA-213ENST00000560127 SMIM22K7EJ46 135 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 CD4P01730 458 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 PDE6AP16499 860 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 COPB2P35606 906 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 RABGGTBP53611 331 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 GJA9P57773 515 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 MICALL1Q8N3F8 863 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 CLUAP1Q96AJ1 413 aa15.5■□□□□ 0.07
RABGGTA-213ENST00000560127 UMODL1Q5DID0 1318 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 DNAJC25-GNG10A0A024R161 153 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 CTAGE5O15320 804 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 FGBP02675 491 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 EEF2P13639 858 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 MYOGP15173 224 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 ACVR2BQ13705 512 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 OTOP2Q7RTS6 562 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 MIER1Q8N108 512 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 LCORLQ8N3X6 602 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 MTIF3Q9H2K0 278 aaKnown RBP15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 HCN4Q9Y3Q4 1203 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 RIPK3Q9Y572 518 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 TET1Q8NFU7 2136 aa15.49■□□□□ 0.07
RABGGTA-213ENST00000560127 ERC2O15083 957 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 IPO8O15397 1037 aaKnown RBP15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 AAK1Q2M2I8 961 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 CCDC144BQ3MJ40 725 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 GNASQ5JWF2 1037 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 PPP2R2DQ66LE6 453 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 FGD4Q96M96 766 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 C1orf115Q9H7X2 142 aa15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.48■□□□□ 0.07
RABGGTA-213ENST00000560127 ZNF532Q9HCE3 1301 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 WDFY4Q6ZS81 3184 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 ZNF467Q7Z7K2 595 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 SLC43A3Q8NBI5 491 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 VWCEQ96DN2 955 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 DDX11Q96FC9 970 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 CCDC17Q96LX7 622 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 TEX13BQ9BXU2 312 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 HIPK3Q9H422 1215 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 SPC25Q9HBM1 224 aa15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 TRIP12Q14669 1992 aaPredicted RBP15.47■□□□□ 0.07
RABGGTA-213ENST00000560127 CYP2D7A0A087X1C5 515 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 PRKAB2O43741 272 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 CDK8P49336 464 aa15.46■□□□□ 0.07
RABGGTA-213ENST00000560127 NKX3-2P78367 333 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms