RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 TAL1P17542 331 aaPredicted RBP10.03□□□□□ -0.8
USP3-217ENST00000560070 GRK4P32298 578 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 STAT2P52630 851 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 SOX10P56693 466 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 ANTXR2P58335 489 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 WTAPQ15007 396 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 ADCK5Q3MIX3 580 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 RNF20Q5VTR2 975 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 NFXL1Q6ZNB6 911 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 FAM160B2Q86V87 743 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 RAB11FIP4Q86YS3 637 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 MB21D1Q8N884 522 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 DCAF4Q8WV16 495 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 AGBL1Q96MI9 1066 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 TCEANC2Q96MN5 208 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 PRR12Q9ULL5 1215 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.8
USP3-217ENST00000560070 DHX16O60231 1041 aaKnown RBP10.02□□□□□ -0.81
USP3-217ENST00000560070 REC8O95072 547 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 PDHBP11177 359 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 ZKSCAN1P17029 563 aaPredicted RBP10.02□□□□□ -0.81
USP3-217ENST00000560070 PTPREP23469 700 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 PRMT2P55345 433 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 TRIM32Q13049 653 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 SEC23AQ15436 765 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 CCL14Q16627 93 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 SYDE2Q5VT97 1194 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 SNRNP48Q6IEG0 339 aaKnown RBP10.02□□□□□ -0.81
USP3-217ENST00000560070 NBPF11Q86T75 865 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 DPP9Q86TI2 863 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 MB21D2Q8IYB1 491 aaPredicted RBP10.02□□□□□ -0.81
USP3-217ENST00000560070 IGDCC4Q8TDY8 1250 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 NUP133Q8WUM0 1156 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 PIBF1Q8WXW3 757 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 ANKS1AQ92625 1134 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 NEK1Q96PY6 1258 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 HOMER2Q9NSB8 354 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 SYNPO2Q9UMS6 1093 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 ADAMTS5Q9UNA0 930 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 RIPK3Q9Y572 518 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 IVNS1ABPQ9Y6Y0 642 aa10.02□□□□□ -0.81
USP3-217ENST00000560070 SLC15A5A6NIM6 579 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 SLC25A27O95847 323 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 PGK2P07205 417 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 ALAS1P13196 640 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 MCM5P33992 734 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 ZNF543Q08ER8 600 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 MAP2K5Q13163 448 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 SART3Q15020 963 aaKnown RBP10.01□□□□□ -0.81
USP3-217ENST00000560070 MTFR1Q15390 333 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 MORN1Q5T089 497 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 IFFO2Q5TF58 517 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 RIOX2Q8IUF8 465 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 CCDC144CPQ8IYA2 1237 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 STAG2Q8N3U4 1231 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 REPS2Q8NFH8 660 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 MMP19Q99542 508 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 MYL10Q9BUA6 226 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 USP26Q9BXU7 913 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 SLC38A10Q9HBR0 1119 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 NAP1L2Q9ULW6 460 aaPredicted RBP10.01□□□□□ -0.81
USP3-217ENST00000560070 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
USP3-217ENST00000560070 NAV1Q8NEY1 1877 aa10□□□□□ -0.81
USP3-217ENST00000560070 MYH1P12882 1939 aa10□□□□□ -0.81
USP3-217ENST00000560070 CCDC69A6NI79 296 aa10□□□□□ -0.81
USP3-217ENST00000560070 COBLO75128 1261 aa10□□□□□ -0.81
USP3-217ENST00000560070 PARP1P09874 1014 aaKnown RBP10□□□□□ -0.81
USP3-217ENST00000560070 FCER1AP12319 257 aa10□□□□□ -0.81
USP3-217ENST00000560070 RXRAP19793 462 aa10□□□□□ -0.81
USP3-217ENST00000560070 ADORA2AP29274 412 aa10□□□□□ -0.81
USP3-217ENST00000560070 RGS2P41220 211 aa10□□□□□ -0.81
USP3-217ENST00000560070 CATIPQ7Z7H3 387 aa10□□□□□ -0.81
USP3-217ENST00000560070 ADGRF4Q8IZF3 695 aa10□□□□□ -0.81
USP3-217ENST00000560070 NPLOC4Q8TAT6 608 aa10□□□□□ -0.81
USP3-217ENST00000560070 DDX11Q96FC9 970 aa10□□□□□ -0.81
USP3-217ENST00000560070 JAKMIP1Q96N16 626 aaKnown RBP10□□□□□ -0.81
USP3-217ENST00000560070 TEX13BQ9BXU2 312 aa10□□□□□ -0.81
USP3-217ENST00000560070 MROH8Q9H579 483 aa10□□□□□ -0.81
USP3-217ENST00000560070 LY9Q9HBG7 655 aa10□□□□□ -0.81
USP3-217ENST00000560070 ZNF214Q9UL59 606 aaPredicted RBP10□□□□□ -0.81
USP3-217ENST00000560070 DOCK1Q14185 1865 aa10□□□□□ -0.81
USP3-217ENST00000560070 KLRF2D3W0D1 207 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 SH2B2O14492 632 aaPredicted RBP9.99□□□□□ -0.81
USP3-217ENST00000560070 STRNO43815 780 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 SEC24BO95487 1268 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 INHAP05111 366 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 SNHG28P0DPA3 235 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 CCL5P13501 91 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 HSPA4P34932 840 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 NT5C2P49902 561 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 UBXN2AP68543 259 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 FGD1P98174 961 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 IRF5Q13568 498 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 KRT32Q14532 448 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 KCTD2Q14681 263 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 PRAMEF19Q5SWL8 479 aa9.99□□□□□ -0.81
USP3-217ENST00000560070 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
USP3-217ENST00000560070 BTNL9Q6UXG8 535 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms