RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 HPS5Q9UPZ3 1129 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 RABGAP1Q9Y3P9 1069 aa10.11□□□□□ -0.79
LRRC28-215ENST00000559774 GOLGA8AA7E2F4 631 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 TLR2O60603 784 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 CDKL5O76039 1030 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 HERVK_113P62684 666 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 HTRA3P83110 453 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 GRM1Q13255 1194 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 KCTD1Q719H9 257 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 TEX2Q8IWB9 1127 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 FAM177A1Q8N128 213 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-215ENST00000559774 NUP133Q8WUM0 1156 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-215ENST00000559774 RIOX1Q9H6W3 641 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 THSD7BQ9C0I4 1608 aa10.1□□□□□ -0.79
LRRC28-215ENST00000559774 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 SPDYE16A6NNV3 312 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 VWA5AO00534 786 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 ZBED4O75132 1171 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 IFNAR1P17181 557 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 COPB2P35606 906 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 IKQ13123 557 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 DGKZQ13574 1117 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 TAF1CQ15572 869 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 ME3Q16798 604 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 SYDE2Q5VT97 1194 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 TMTC3Q6ZXV5 915 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 STAG2Q8N3U4 1231 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 JMYQ8N9B5 988 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 SMCR8Q8TEV9 937 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 GTF3C6Q969F1 213 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 MTMR8Q96EF0 704 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 ZIC5Q96T25 663 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 NUP88Q99567 741 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 P2RX7Q99572 595 aaKnown RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 LLPHQ9BRT6 129 aaKnown RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 RANBP17Q9H2T7 1088 aaKnown RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 SLC38A10Q9HBR0 1119 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-215ENST00000559774 MORF4L1Q9UBU8 362 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
LRRC28-215ENST00000559774 ADGRA2Q96PE1 1338 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 hCG_1984214I3L0E3 225 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 CPLX1O14810 134 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 ZBTB5O15062 677 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 GOLGA8HP0CJ92 632 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 CCNA1P78396 465 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 FUT2Q10981 343 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 NTRK3Q16288 839 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 FAM110CQ1W6H9 321 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 ADGRF4Q8IZF3 695 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 ZNF713Q8N859 430 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-215ENST00000559774 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 RRP36Q96EU6 259 aaKnown RBP10.08□□□□□ -0.8
LRRC28-215ENST00000559774 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 RNF26Q9BY78 433 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-215ENST00000559774 JMJD4Q9H9V9 463 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 WBP1LQ9NX94 342 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 RNF186Q9NXI6 227 aa10.08□□□□□ -0.8
LRRC28-215ENST00000559774 NAP1L2Q9ULW6 460 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-215ENST00000559774 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-215ENST00000559774 FRMPD2Q68DX3 1309 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 PNMA6FA0A0J9YX94 578 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 PRPF3O43395 683 aaKnown RBP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 SLC25A27O95847 323 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 ICAM1P05362 532 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 BCRP11274 1271 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 CDC27P30260 824 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 ADD1P35611 737 aaKnown RBP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 SCRN1Q12765 414 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 C17orf99Q6UX52 265 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 SRBD1Q8N5C6 995 aaKnown RBP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 SAMD3Q8N6K7 520 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 SHCBP1Q8NEM2 672 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 REPS2Q8NFH8 660 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 GPRC5AQ8NFJ5 357 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 ATG4CQ96DT6 458 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 TMX3Q96JJ7 454 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 TEX13BQ9BXU2 312 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 UBA5Q9GZZ9 404 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 FBXO28Q9NVF7 368 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 RBPJLQ9UBG7 517 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 SEC63Q9UGP8 760 aaKnown RBP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 ISY1Q9ULR0 285 aaKnown RBP10.07□□□□□ -0.8
LRRC28-215ENST00000559774 MTMR7Q9Y216 660 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 MYH4Q9Y623 1939 aa10.07□□□□□ -0.8
LRRC28-215ENST00000559774 PTPRFP10586 1907 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 K7ELQ4 463 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 CYTH3O43739 400 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 PLEKHA8P1O95397 391 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 FMNL1O95466 1100 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-215ENST00000559774 CYP2C8P10632 490 aa10.06□□□□□ -0.8
LRRC28-215ENST00000559774 RXRAP19793 462 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms