RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 TMPRSS13Q9BYE2 586 aa8.19□□□□□ -1.1
CRNDE-207ENST00000559598 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
CRNDE-207ENST00000559598 ATG3Q9NT62 314 aa8.19□□□□□ -1.1
CRNDE-207ENST00000559598 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
CRNDE-207ENST00000559598 FAM8A1Q9UBU6 413 aa8.19□□□□□ -1.1
CRNDE-207ENST00000559598 GPN3Q9UHW5 284 aaPredicted RBP8.19□□□□□ -1.1
CRNDE-207ENST00000559598 SCN4AP35499 1836 aa8.19□□□□□ -1.1
CRNDE-207ENST00000559598 FER1L6Q2WGJ9 1857 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 ERVV-2B6SEH9 535 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 HSP90AB1P08238 724 aaKnown RBP8.18□□□□□ -1.1
CRNDE-207ENST00000559598 PHKG2P15735 406 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 CTCFP49711 727 aaPredicted RBP8.18□□□□□ -1.1
CRNDE-207ENST00000559598 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 AP3B2Q13367 1082 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 LRP8Q14114 963 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 EXOSC6Q5RKV6 272 aaKnown RBP8.18□□□□□ -1.1
CRNDE-207ENST00000559598 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 CORO1BQ9BR76 489 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 PCGF6Q9BYE7 350 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 RNF19AQ9NV58 838 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 USP42Q9H9J4 1324 aaKnown RBP8.18□□□□□ -1.1
CRNDE-207ENST00000559598 ADAMTS7Q9UKP4 1686 aa8.18□□□□□ -1.1
CRNDE-207ENST00000559598 TJP1Q07157 1748 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 ECEL1O95672 775 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 CTSBP07858 339 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 USP17L7P0C7H9 530 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 EIF4BP23588 611 aaKnown RBP8.17□□□□□ -1.1
CRNDE-207ENST00000559598 UVSSAQ2YD98 709 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 FAM46AQ96IP4 442 aaKnown RBP8.17□□□□□ -1.1
CRNDE-207ENST00000559598 CYP4F12Q9HCS2 524 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 PPM1HQ9ULR3 514 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 CNTNAP1P78357 1384 aa8.17□□□□□ -1.1
CRNDE-207ENST00000559598 SART1O43290 800 aaKnown RBP8.16□□□□□ -1.1
CRNDE-207ENST00000559598 HP1BP3Q5SSJ5 553 aaPredicted RBP8.16□□□□□ -1.1
CRNDE-207ENST00000559598 SMG8Q8ND04 991 aaKnown RBP8.16□□□□□ -1.1
CRNDE-207ENST00000559598 TESK2Q96S53 571 aa8.16□□□□□ -1.1
CRNDE-207ENST00000559598 SUGCTQ9HAC7 445 aa8.16□□□□□ -1.1
CRNDE-207ENST00000559598 PARP2Q9UGN5 583 aa8.16□□□□□ -1.1
CRNDE-207ENST00000559598 AK5Q9Y6K8 562 aa8.16□□□□□ -1.1
CRNDE-207ENST00000559598 PDE4DIPQ5VU43 2346 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 ARFGEF2Q9Y6D5 1785 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
CRNDE-207ENST00000559598 FOXN1O15353 648 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 CHRNA5P30532 468 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 DAB2P98082 770 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 DDR1Q08345 913 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 TRIM26Q12899 539 aaPredicted RBP8.15□□□□□ -1.1
CRNDE-207ENST00000559598 TPTE2Q6XPS3 522 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 ARMC10Q8N2F6 343 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 UTP4Q969X6 686 aaKnown RBP8.15□□□□□ -1.1
CRNDE-207ENST00000559598 CEP44Q9C0F1 390 aa8.15□□□□□ -1.1
CRNDE-207ENST00000559598 SCN11AQ9UI33 1791 aa8.15□□□□□ -1.11
CRNDE-207ENST00000559598 TIAF1O95411 115 aa8.14□□□□□ -1.11
CRNDE-207ENST00000559598 PREPP48147 710 aa8.14□□□□□ -1.11
CRNDE-207ENST00000559598 TAGLNQ01995 201 aaKnown RBP8.14□□□□□ -1.11
CRNDE-207ENST00000559598 PRR23CQ6ZRP0 262 aa8.14□□□□□ -1.11
CRNDE-207ENST00000559598 TTLL6Q8N841 843 aa8.14□□□□□ -1.11
CRNDE-207ENST00000559598 C12orf50Q8NA57 414 aaPredicted RBP8.14□□□□□ -1.11
CRNDE-207ENST00000559598 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
CRNDE-207ENST00000559598 SIN3AQ96ST3 1273 aa8.14□□□□□ -1.11
CRNDE-207ENST00000559598 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 DHX15O43143 795 aaKnown RBP8.13□□□□□ -1.11
CRNDE-207ENST00000559598 FBXO24O75426 580 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 TM4SF1P30408 202 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 CRKLP46109 303 aaKnown RBP8.13□□□□□ -1.11
CRNDE-207ENST00000559598 MFAP1P55081 439 aaKnown RBP8.13□□□□□ -1.11
CRNDE-207ENST00000559598 PSMD2Q13200 908 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
CRNDE-207ENST00000559598 TMC4Q7Z404 712 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 SULF2Q8IWU5 870 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 MYRFLQ96LU7 910 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 THSD7BQ9C0I4 1608 aa8.13□□□□□ -1.11
CRNDE-207ENST00000559598 LTBP3Q9NS15 1303 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 ST20-MTHFSA0A0A6YYL1 179 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 ENC1O14682 589 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 GSTP1P09211 210 aaKnown RBP8.12□□□□□ -1.11
CRNDE-207ENST00000559598 NME2P22392 152 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 PDE3AQ14432 1141 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 PDZD3Q86UT5 571 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 ABHD8Q96I13 439 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 FAM161BQ96MY7 647 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 BCL2L13Q9BXK5 485 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 RAD18Q9NS91 495 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 SRP68Q9UHB9 627 aaKnown RBP8.12□□□□□ -1.11
CRNDE-207ENST00000559598 RNF112Q9ULX5 631 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 CACNA1SQ13698 1873 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 ANKRD31Q8N7Z5 1873 aa8.12□□□□□ -1.11
CRNDE-207ENST00000559598 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
CRNDE-207ENST00000559598 H0YIN7 160 aa8.11□□□□□ -1.11
CRNDE-207ENST00000559598 PPM1GO15355 546 aaPredicted RBP8.11□□□□□ -1.11
CRNDE-207ENST00000559598 GAS2O43903 313 aaKnown RBP8.11□□□□□ -1.11
CRNDE-207ENST00000559598 DRD2P14416 443 aa8.11□□□□□ -1.11
CRNDE-207ENST00000559598 MAP2K1Q02750 393 aaPredicted RBP8.11□□□□□ -1.11
CRNDE-207ENST00000559598 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
CRNDE-207ENST00000559598 AMOTQ4VCS5 1084 aa8.11□□□□□ -1.11
CRNDE-207ENST00000559598 PLEKHO1Q53GL0 409 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms