RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SART3Q15020 963 aaKnown RBP5.14□□□□□ -1.59
SNX1-205ENST00000559339 CCDC96Q2M329 555 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 BMP2KLQ5H9B9 411 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 KIAA1755Q5JYT7 1200 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 MORN1Q5T089 497 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 ERICH6BQ5W0A0 696 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 RCSD1Q6JBY9 416 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 RALYLQ86SE5 291 aaKnown RBP5.14□□□□□ -1.59
SNX1-205ENST00000559339 CPXCR1Q8N123 301 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 DDX11Q96FC9 970 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 NUP88Q99567 741 aaPredicted RBP5.14□□□□□ -1.59
SNX1-205ENST00000559339 KAT14Q9H8E8 782 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 INCENPQ9NQS7 918 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 IL17RBQ9NRM6 502 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 FBXO28Q9NVF7 368 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 FBXO40Q9UH90 709 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 ADAMTS5Q9UNA0 930 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 MTMR7Q9Y216 660 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 LOC285556D6RIA3 1793 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 PHIPQ8WWQ0 1821 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 CDK5RAP2Q96SN8 1893 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 MYH7P12883 1935 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 POTEFA5A3E0 1075 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 B4E1Z4 1266 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 PITPNM1O00562 1244 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 ATP2A1O14983 1001 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 PLA2G6O60733 806 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 SGPL1O95470 568 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 HOXC6P09630 235 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 PRKAR2AP13861 404 aaKnown RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 MTFR1Q15390 333 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 GPATCH4Q5T3I0 446 aaKnown RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 IFIT1BQ5T764 474 aaKnown RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 RNF20Q5VTR2 975 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 OLFML2BQ68BL8 750 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 SNRNP48Q6IEG0 339 aaKnown RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 POTEEQ6S8J3 1075 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 KCTD1Q719H9 257 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 RIOX2Q8IUF8 465 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 TBC1D10CQ8IV04 446 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 ANKRD35Q8N283 1001 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 CHST13Q8NET6 341 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 NCOA7Q8NI08 942 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 U2AF1L4Q8WU68 220 aaKnown RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 DCAF4Q8WV16 495 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 TRIB2Q92519 343 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 DEFB118Q96PH6 123 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 ZSCAN10Q96SZ4 725 aaPredicted RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 MMP19Q99542 508 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 TMEM47Q9BQJ4 181 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 ZKSCAN3Q9BRR0 538 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 HTATIP2Q9BUP3 242 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.13□□□□□ -1.59
SNX1-205ENST00000559339 UNC93B1Q9H1C4 597 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 SLC38A10Q9HBR0 1119 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 ANO2Q9NQ90 1003 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 PAK6Q9NQU5 681 aaPredicted RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 ZSWIM5Q9P217 1185 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 ZNF214Q9UL59 606 aaPredicted RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 ATAD5Q96QE3 1844 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 PTPRFP10586 1907 aa5.13□□□□□ -1.59
SNX1-205ENST00000559339 BAZ2AQ9UIF9 1905 aaKnown RBP5.13□□□□□ -1.59
SNX1-205ENST00000559339 KIAA0100Q14667 2235 aaKnown RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 CYP21A2P08686 494 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 PDHBP11177 359 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 CNGA1P29973 690 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 NOVP48745 357 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 CACNB2Q08289 660 aaPredicted RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 CCL14Q16627 93 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 TKFCQ3LXA3 575 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 MAP3K21Q5TCX8 1036 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 MSL3Q8N5Y2 521 aaKnown RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 ANKLE1Q8NAG6 615 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 PNMA1Q8ND90 353 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 USP6NLQ92738 828 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 MAP4K1Q92918 833 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 CHMP4CQ96CF2 233 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 NBPF3Q9H094 633 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 ACAD9Q9H845 621 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 RAVER2Q9HCJ3 691 aaKnown RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 HOMER2Q9NSB8 354 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 PPP4R2Q9NY27 417 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 CCPG1Q9ULG6 757 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 PRR12Q9ULL5 1215 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 CNPY2Q9Y2B0 182 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 DIS3Q9Y2L1 958 aaKnown RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 TNKSO95271 1327 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 NEDD4P46934 1319 aa5.12□□□□□ -1.59
SNX1-205ENST00000559339 FRMPD2Q68DX3 1309 aaPredicted RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 MKI67P46013 3256 aaKnown RBP5.12□□□□□ -1.59
SNX1-205ENST00000559339 B4DLN1 442 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 E7EWF7 191 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 IFIT3O14879 490 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 DHX16O60231 1041 aaKnown RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 COBLO75128 1261 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 CDC45O75419 566 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 FARP2O94887 1054 aaPredicted RBP5.11□□□□□ -1.59
SNX1-205ENST00000559339 REC8O95072 547 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 ICAM1P05362 532 aa5.11□□□□□ -1.59
SNX1-205ENST00000559339 PGK2P07205 417 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms