RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 SYNRGQ9UMZ2 1314 aa19.51■□□□□ 0.71
CDC42BPB-205ENST00000559245 ACLYP53396 1101 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 FAAP100Q0VG06 881 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 ZSCAN25Q6NSZ9 544 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 ANKRD33Q7Z3H0 272 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 MSL3Q8N5Y2 521 aaKnown RBP19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 TOX2Q96NM4 488 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 NUP88Q99567 741 aaPredicted RBP19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 SLF1Q9BQI6 1058 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 TEX13BQ9BXU2 312 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 STARD7Q9NQZ5 370 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 ZBTB40Q9NUA8 1239 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 ARPP21Q9UBL0 812 aaPredicted RBP19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 TTC28Q96AY4 2481 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 SYNGAP1Q96PV0 1343 aa19.5■□□□□ 0.71
CDC42BPB-205ENST00000559245 DCDC2CA8MYV0 355 aa19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 SNRNP48Q6IEG0 339 aaKnown RBP19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 KLHDC9Q8NEP7 349 aa19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 NUP133Q8WUM0 1156 aa19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 DDX11Q96FC9 970 aa19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 FAM184BQ9ULE4 1060 aa19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
CDC42BPB-205ENST00000559245 MOXD2PA6NHM9 499 aa19.48■□□□□ 0.71
CDC42BPB-205ENST00000559245 SNAI1O95863 264 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-205ENST00000559245 MAMDC4Q6UXC1 1216 aa19.48■□□□□ 0.71
CDC42BPB-205ENST00000559245 ZHX1Q9UKY1 873 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-205ENST00000559245 RIPK3Q9Y572 518 aa19.48■□□□□ 0.71
CDC42BPB-205ENST00000559245 DNAJC25-GNG10A0A024R161 153 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 F5H6K3 240 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 RASA1P20936 1047 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 SLC4A3P48751 1232 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 KLRC3Q07444 240 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 KCNA10Q16322 511 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 SBK1Q52WX2 424 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 STK11IPQ8N1F8 1099 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 PRPF38AQ8NAV1 312 aaKnown RBP19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 MKNK2Q9HBH9 465 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 NYAP2Q9P242 653 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 GBF1Q92538 1859 aa19.47■□□□□ 0.71
CDC42BPB-205ENST00000559245 MYADML2A6NDP7 307 aa19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 DUSP11O75319 330 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 NDUFB10O96000 172 aa19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 TIMP1P01033 207 aa19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 DNAJB2P25686 324 aa19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 GRIN2CQ14957 1233 aa19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 CCSAPQ6IQ19 270 aaPredicted RBP19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 CPXCR1Q8N123 301 aa19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 STRBPQ96SI9 672 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-205ENST00000559245 MINDY4BA8MYZ0 360 aa19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 ATP2A1O14983 1001 aa19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 ZNF467Q7Z7K2 595 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 GLT1D1Q96MS3 346 aa19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 TBX21Q9UL17 535 aa19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 CTDP1Q9Y5B0 961 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 ELP1O95163 1332 aa19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 MROH7Q68CQ1 1323 aa19.45■□□□□ 0.7
CDC42BPB-205ENST00000559245 GSG1L2A8MUP6 293 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 ZBED4O75132 1171 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 C6orf222P0C671 652 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 CST5P28325 142 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 IRX5P78411 483 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 ACVR2BQ13705 512 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 MFSD5Q6N075 450 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 GIMAP6Q6P9H5 292 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.44■□□□□ 0.71e-10■■■■■ 27.7
CDC42BPB-205ENST00000559245 LRRCC1Q9C099 1032 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 CLIP2Q9UDT6 1046 aa19.44■□□□□ 0.7
CDC42BPB-205ENST00000559245 ADCY6O43306 1168 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 ASGR1P07306 291 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 CDK7P50613 346 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 ANKRD35Q8N283 1001 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 PCSK9Q8NBP7 692 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 SYMPKQ92797 1274 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 KIFC2Q96AC6 838 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 ABHD16BQ9H3Z7 469 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 ZNF576Q9H609 170 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 SPC25Q9HBM1 224 aa19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 RAVER2Q9HCJ3 691 aaKnown RBP19.43■□□□□ 0.7
CDC42BPB-205ENST00000559245 IGKV6D-41A0A0C4DH26 115 aa19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 SMARCA5O60264 1052 aaPredicted RBP19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 PPIGQ13427 754 aaKnown RBP eCLIP19.42■□□□□ 0.74e-7■□□□□ 11.3
CDC42BPB-205ENST00000559245 CCDC144BQ3MJ40 725 aa19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 VTI1AQ96AJ9 217 aa19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 TIFAQ96CG3 184 aa19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 FGD4Q96M96 766 aa19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 UPF3AQ9H1J1 476 aaKnown RBP19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 SLC38A10Q9HBR0 1119 aa19.42■□□□□ 0.7
CDC42BPB-205ENST00000559245 GJA9P57773 515 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 TMEM240Q5SV17 173 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 C16orf59Q7L2K0 433 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 MIER1Q8N108 512 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 USP38Q8NB14 1042 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 OSBP2Q969R2 916 aa19.41■□□□□ 0.7
CDC42BPB-205ENST00000559245 MKL1Q969V6 931 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms