RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
AP3S2-209ENST00000559162 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
AP3S2-209ENST00000559162 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
AP3S2-209ENST00000559162 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
AP3S2-209ENST00000559162 TINF2Q9BSI4 451 aa12.36□□□□□ -0.43
AP3S2-209ENST00000559162 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
AP3S2-209ENST00000559162 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
AP3S2-209ENST00000559162 KBTBD13C9JR72 458 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 ORC4O43929 436 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 PGK2P07205 417 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 BMP8BP34820 402 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 SLC1A4P43007 532 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 STAT2P52630 851 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 MFAP1P55081 439 aaKnown RBP12.35□□□□□ -0.43
AP3S2-209ENST00000559162 ZNF792Q3KQV3 632 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 FAM47AQ5JRC9 791 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP3S2-209ENST00000559162 FAM160B2Q86V87 743 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 GDF15Q99988 308 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 ZMYND8Q9ULU4 1186 aaPredicted RBP12.35□□□□□ -0.43
AP3S2-209ENST00000559162 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
AP3S2-209ENST00000559162 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
AP3S2-209ENST00000559162 A0A0D9SFI3 127 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 FGRP09769 529 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 RARBP10826 455 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 PCP11498 1178 aaKnown RBP12.34□□□□□ -0.43
AP3S2-209ENST00000559162 LRRC26Q2I0M4 334 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 CHST13Q8NET6 341 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 DDX11Q96FC9 970 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 FAM227BQ96M60 508 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 SENP6Q9GZR1 1112 aaPredicted RBP12.34□□□□□ -0.43
AP3S2-209ENST00000559162 OSBPL3Q9H4L5 887 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
AP3S2-209ENST00000559162 SYNGAP1Q96PV0 1343 aa12.34□□□□□ -0.43
AP3S2-209ENST00000559162 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
AP3S2-209ENST00000559162 PLA2G6O60733 806 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 AKR1A1P14550 325 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 NT5C2P49902 561 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 NUCB1Q02818 461 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 IKQ13123 557 aaPredicted RBP12.33□□□□□ -0.44
AP3S2-209ENST00000559162 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
AP3S2-209ENST00000559162 B4GALNT3Q6L9W6 998 aa12.33□□□□□ -0.44
AP3S2-209ENST00000559162 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
AP3S2-209ENST00000559162 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
AP3S2-209ENST00000559162 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 HIP1O00291 1037 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 FGAP02671 866 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 HSPD1P10809 573 aaKnown RBP12.32□□□□□ -0.44
AP3S2-209ENST00000559162 SYN1P17600 705 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 MAGEA10P43363 369 aaPredicted RBP12.32□□□□□ -0.44
AP3S2-209ENST00000559162 NOVP48745 357 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 PRAMEF19Q5SWL8 479 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 GJC2Q5T442 439 aaPredicted RBP12.32□□□□□ -0.44
AP3S2-209ENST00000559162 MAMDC4Q6UXC1 1216 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 RNF180Q86T96 592 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 ANKRD35Q8N283 1001 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 STAG1Q8WVM7 1258 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 RILPL2Q969X0 211 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
AP3S2-209ENST00000559162 ACAD9Q9H845 621 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 XPNPEP3Q9NQH7 507 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 TOMM22Q9NS69 142 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 PRKAG2Q9UGJ0 569 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 RIPK3Q9Y572 518 aa12.32□□□□□ -0.44
AP3S2-209ENST00000559162 SDSP20132 328 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 MCCP23508 829 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 SLC4A3P48751 1232 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 SNX17Q15036 470 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 LRRC41Q15345 812 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 ANO1Q5XXA6 986 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 RCSD1Q6JBY9 416 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 ZNF589Q86UQ0 364 aaPredicted RBP12.31□□□□□ -0.44
AP3S2-209ENST00000559162 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 DCAF4Q8WV16 495 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 LAMA4Q16363 1823 aa12.31□□□□□ -0.44
AP3S2-209ENST00000559162 RANBP2P49792 3224 aaKnown RBP12.31□□□□□ -0.44
AP3S2-209ENST00000559162 NMT2O60551 498 aa12.3□□□□□ -0.44
AP3S2-209ENST00000559162 IGHDP01880 384 aa12.3□□□□□ -0.44
AP3S2-209ENST00000559162 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
AP3S2-209ENST00000559162 ZNF865P0CJ78 1059 aaPredicted RBP12.3□□□□□ -0.44
AP3S2-209ENST00000559162 TOP1P11387 765 aaKnown RBP12.3□□□□□ -0.44
AP3S2-209ENST00000559162 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
AP3S2-209ENST00000559162 RTP1P59025 263 aa12.3□□□□□ -0.44
AP3S2-209ENST00000559162 CCDC96Q2M329 555 aa12.3□□□□□ -0.44
AP3S2-209ENST00000559162 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
AP3S2-209ENST00000559162 C1orf53Q5VUE5 145 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms