RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 SCNN1DP51172 638 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 USP17L2Q6R6M4 530 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
SEC11A-206ENST00000558924 RTL9Q8NET4 1388 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 SPATA31A1Q5TZJ5 1347 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 SYNRGQ9UMZ2 1314 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 BMP6P22004 513 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 GRIK5Q16478 980 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 RAD9BQ6WBX8 426 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 NOC3LQ8WTT2 800 aaKnown RBP13.62□□□□□ -0.23
SEC11A-206ENST00000558924 ARHGEF1Q92888 912 aaKnown RBP13.62□□□□□ -0.23
SEC11A-206ENST00000558924 PTPREP23469 700 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 TEX11Q8IYF3 940 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 BSDC1Q9NW68 430 aaPredicted RBP13.62□□□□□ -0.23
SEC11A-206ENST00000558924 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
SEC11A-206ENST00000558924 ADAMTS3O15072 1205 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 ZEB2O60315 1214 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 ATP2C2O75185 946 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 CXCR5P32302 372 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 ARID5AQ03989 594 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 CCDC122Q5T0U0 273 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 LRRC31Q6UY01 552 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 TC2NQ8N9U0 490 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 KAT2BQ92831 832 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 GDAQ9Y2T3 454 aa13.62□□□□□ -0.23
SEC11A-206ENST00000558924 TRIM21P19474 475 aaKnown RBP13.61□□□□□ -0.23
SEC11A-206ENST00000558924 MNAT1P51948 309 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 CYP27A1Q02318 531 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
SEC11A-206ENST00000558924 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
SEC11A-206ENST00000558924 RUFY1Q96T51 708 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 PNKPQ96T60 521 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 USP21Q9UK80 565 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 MRC1P22897 1456 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 SCG2P13521 617 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 KIF5BP33176 963 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 VSNL1P62760 191 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 TRIM47Q96LD4 638 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 INTS13Q9NVM9 706 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 BIN2Q9UBW5 565 aaPredicted RBP13.61□□□□□ -0.23
SEC11A-206ENST00000558924 KCPQ6ZWJ8 1503 aa13.61□□□□□ -0.23
SEC11A-206ENST00000558924 A0A087X0B3 334 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 TRIM49BA6NDI0 452 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 GTF2IP78347 998 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 TCP10Q12799 353 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 DOK7Q18PE1 504 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.6□□□□□ -0.23
SEC11A-206ENST00000558924 HDXQ7Z353 690 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 NOA1Q8NC60 698 aaKnown RBP13.6□□□□□ -0.23
SEC11A-206ENST00000558924 EHD4Q9H223 541 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 FOXP1Q9H334 677 aaPredicted RBP13.6□□□□□ -0.23
SEC11A-206ENST00000558924 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 TRPM3Q9HCF6 1732 aaPredicted RBP13.6□□□□□ -0.23
SEC11A-206ENST00000558924 BAG3O95817 575 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CUL4BQ13620 913 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 FAM204AQ9H8W3 233 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
SEC11A-206ENST00000558924 UTRNP46939 3433 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 IKBKBO14920 756 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CCNT1O60563 726 aaKnown RBP13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CCDC172P0C7W6 258 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 TXKP42681 527 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 MFSD14BQ5SR56 506 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 DYMQ7RTS9 669 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 CEP83Q9Y592 693 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 KIF1AQ12756 1690 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 DCCP43146 1447 aa13.6□□□□□ -0.23
SEC11A-206ENST00000558924 PDE6BP35913 854 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 PLCD1P51178 756 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 ALX1Q15699 326 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 MSL1Q68DK7 614 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 CHP1Q99653 195 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 RIOK1Q9BRS2 568 aaKnown RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 SUFUQ9UMX1 484 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 STX10O60499 249 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 CACNB3P54284 484 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 HPS3Q969F9 1004 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 EP400Q96L91 3159 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 MYO1BO43795 1136 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 BRD2P25440 801 aaKnown RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 TNNI2P48788 182 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 CCDC181Q5TID7 509 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 DTHD1Q6ZMT9 781 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 GJA10Q969M2 543 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms