RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TPM4P67936 248 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 PCDHA5Q9Y5H7 936 aa12.31□□□□□ -0.44
CSPG4P5-201ENST00000558731 PP2D1A8MPX8 630 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 TXLNAP40222 546 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 TMED8Q6PL24 325 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 TRMT44Q8IYL2 757 aaKnown RBP12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 PPP1R9BQ96SB3 815 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 MAPK8IP1Q9UQF2 711 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 CHD4Q14839 1912 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 AP5Z1O43299 807 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 RASSF7Q02833 373 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 UVSSAQ2YD98 709 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 RSBN1LQ6PCB5 846 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 REXO1Q8N1G1 1221 aaKnown RBP12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
CSPG4P5-201ENST00000558731 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 UBA7P41226 1012 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 KRBA2Q6ZNG9 492 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 FBXO2Q9UK22 296 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 GOLGA6L6A8MZA4 724 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 PTPREP23469 700 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 TXKP42681 527 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 TPD52L1Q16890 204 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 SLC35G1Q2M3R5 365 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 NBPF9Q3BBW0 867 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 SLX4Q8IY92 1834 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 SERPINC1P01008 464 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 GNA11P29992 359 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 DHX36Q9H2U1 1008 aaKnown RBP12.29□□□□□ -0.44
CSPG4P5-201ENST00000558731 PTGS1P23219 599 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 CXCL9Q07325 125 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 DTHD1Q6ZMT9 781 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 SMYD4Q8IYR2 804 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 ADGRF4Q8IZF3 695 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 DNAJC18Q9H819 358 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 POSTNQ15063 836 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 NONOQ15233 471 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 CIAPIN1Q6FI81 312 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 SH3BP5LQ7L8J4 393 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC186Q7Z3E2 898 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 SAMD7Q7Z3H4 446 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 TBCKQ8TEA7 893 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 BARHL2Q9NY43 387 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 SERPINA10Q9UK55 444 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 STXBP3O00186 592 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 C7orf43Q8WVR3 580 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 GJA10Q969M2 543 aa12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P5-201ENST00000558731 ADCY7P51828 1080 aa12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 CCDC174Q6PII3 467 aa12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 FCHSD1Q86WN1 690 aa12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 PCDHA6Q9UN73 950 aa12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 PCDHA8Q9Y5H6 950 aa12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 SRPRBQ9Y5M8 271 aaKnown RBP12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 SNED1Q8TER0 1413 aa12.27□□□□□ -0.44
CSPG4P5-201ENST00000558731 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 STAT6P42226 847 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 TECP42680 631 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 TRMT1LQ7Z2T5 733 aaKnown RBP12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 METTL16Q86W50 562 aaKnown RBP12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 KIFC2Q96AC6 838 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 KANSL2Q9H9L4 492 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 ZNF70Q9UC06 446 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 F5H6K3 240 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 ECE1P42892 770 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 KLRC3Q07444 240 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 ASPRV1Q53RT3 343 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
CSPG4P5-201ENST00000558731 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms