RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 PTPN22Q9Y2R2 807 aa9.24□□□□□ -0.93
RTF1-205ENST00000558298 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 SMIM22K7EJ46 135 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 RIOK3O14730 519 aaKnown RBP9.23□□□□□ -0.93
RTF1-205ENST00000558298 CCP110O43303 1012 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 CAPN15O75808 1086 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 GNRH1P01148 92 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 CYP2C8P10632 490 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 CDC25BP30305 580 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 GCLCP48506 637 aaPredicted RBP9.23□□□□□ -0.93
RTF1-205ENST00000558298 MTMR2Q13614 643 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 SEPT2Q15019 361 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 AKNAD1Q5T1N1 836 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 SIAH1Q8IUQ4 282 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 GMCL1P1Q8NEA9 526 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 MAP4K1Q92918 833 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 ARMC5Q96C12 935 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 ESYT1Q9BSJ8 1104 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 MTA3Q9BTC8 594 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 ARHGAP39Q9C0H5 1083 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 ARHGEF10LQ9HCE6 1279 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 KCND1Q9NSA2 647 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 TMOD4Q9NZQ9 345 aa9.23□□□□□ -0.93
RTF1-205ENST00000558298 U3KPZ7 1027 aaPredicted RBP9.23□□□□□ -0.93
RTF1-205ENST00000558298 A0A1W2PRG0 241 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 MINDY4BA8MYZ0 360 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 WDR46O15213 610 aaKnown RBP9.22□□□□□ -0.93
RTF1-205ENST00000558298 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 VCAM1P19320 739 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 TNNT3P45378 269 aaPredicted RBP9.22□□□□□ -0.93
RTF1-205ENST00000558298 HMGCS2P54868 508 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 IMMTQ16891 758 aaKnown RBP9.22□□□□□ -0.93
RTF1-205ENST00000558298 FAM110CQ1W6H9 321 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 POTEEQ6S8J3 1075 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 ZNF444Q8N0Y2 327 aaPredicted RBP9.22□□□□□ -0.93
RTF1-205ENST00000558298 KIF18AQ8NI77 898 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 TTC14Q96N46 770 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 VCPKMTQ9H867 229 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 CNNM2Q9H8M5 875 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 MKNK2Q9HBH9 465 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 MTMR4Q9NYA4 1195 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 MORF4L1Q9UBU8 362 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 TRIM17Q9Y577 477 aa9.22□□□□□ -0.93
RTF1-205ENST00000558298 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.93
RTF1-205ENST00000558298 ZNF213O14771 459 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 PLA2G6O60733 806 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 TTLL1O95922 423 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 TUBB4BP68371 445 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.94
RTF1-205ENST00000558298 NCBP1Q09161 790 aaKnown RBP9.21□□□□□ -0.94
RTF1-205ENST00000558298 SLC4A8Q2Y0W8 1093 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 TSGA10IPQ3SY00 556 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 CCDC178Q5BJE1 867 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 RCSD1Q6JBY9 416 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 TBC1D10CQ8IV04 446 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 FAM200AQ8TCP9 573 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 ACER1Q8TDN7 264 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 ANKS1AQ92625 1134 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 CEP95Q96GE4 821 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 GMCL1Q96IK5 515 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 TRIM47Q96LD4 638 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.94
RTF1-205ENST00000558298 LSG1Q9H089 658 aaKnown RBP9.21□□□□□ -0.94
RTF1-205ENST00000558298 CPA4Q9UI42 421 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 ADAMTS5Q9UNA0 930 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 COL11A1P12107 1806 aaPredicted RBP9.21□□□□□ -0.94
RTF1-205ENST00000558298 DOCK3Q8IZD9 2030 aa9.21□□□□□ -0.94
RTF1-205ENST00000558298 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L15C9J2P7 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L13C9JLJ4 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L11C9JVI0 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L18D6R9N7 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L22D6RA61 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L17D6RBQ6 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L19D6RCP7 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L20D6RJB6 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 CLGNO14967 610 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
RTF1-205ENST00000558298 CYP21A2P08686 494 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 TSPY3P0CV98 308 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 TSPY8P0CW00 308 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 EEF2P13639 858 aaKnown RBP9.2□□□□□ -0.94
RTF1-205ENST00000558298 OSBPP22059 807 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
RTF1-205ENST00000558298 PRMT2P55345 433 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 USP17L24Q0WX57 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 ARHGEF6Q15052 776 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 NECTIN1Q15223 517 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 CATSPERGQ6ZRH7 1159 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 MFSD6Q6ZSS7 791 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 DGKHQ86XP1 1220 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 MB21D1Q8N884 522 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 RNF214Q8ND24 703 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 ESR2Q92731 530 aa9.2□□□□□ -0.94
RTF1-205ENST00000558298 KCNB2Q92953 911 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms