RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 DUOX1Q9NRD9 1551 aa8.52□□□□□ -1.04
TRPM1-206ENST00000558212 LRRC37AA6NMS7 1700 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 DDX60Q8IY21 1712 aaKnown RBP8.52□□□□□ -1.05
TRPM1-206ENST00000558212 A0A0C4DFX4 3053 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 TBC1D8O95759 1140 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 ST13P50502 369 aaKnown RBP8.52□□□□□ -1.05
TRPM1-206ENST00000558212 RAD51AP2Q09MP3 1159 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 HYAL2Q12891 473 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 SLC10A5Q5PT55 438 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 TTLL7Q6ZT98 887 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 SYT9Q86SS6 491 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 CDCA5Q96FF9 252 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 PHACTR3Q96KR7 559 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 DZANK1Q9NVP4 752 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 GGA3Q9NZ52 723 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 CENPFP49454 3210 aa8.52□□□□□ -1.05
TRPM1-206ENST00000558212 SZT2Q5T011 3432 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 LAMB2P55268 1798 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 FKTNO75072 461 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 HSPA5P11021 654 aaKnown RBP8.51□□□□□ -1.05
TRPM1-206ENST00000558212 PRKAR2BP31323 418 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 TM4SF4P48230 202 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 GRAPQ13588 217 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 MCM10Q7L590 875 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 CCNJLQ8IV13 435 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 NGEFQ8N5V2 710 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 GRAPLQ8TC17 118 aaPredicted RBP8.51□□□□□ -1.05
TRPM1-206ENST00000558212 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 UTP14AQ9BVJ6 771 aaKnown RBP8.51□□□□□ -1.05
TRPM1-206ENST00000558212 KLF15Q9UIH9 416 aa8.51□□□□□ -1.05
TRPM1-206ENST00000558212 ADARB2-AS1A8MUL3 147 aa8.5□□□□□ -1.05
TRPM1-206ENST00000558212 HTATSF1O43719 755 aaKnown RBP8.5□□□□□ -1.05
TRPM1-206ENST00000558212 GADD45BO75293 160 aaPredicted RBP8.5□□□□□ -1.05
TRPM1-206ENST00000558212 ARAFP10398 606 aa8.5□□□□□ -1.05
TRPM1-206ENST00000558212 ACPPP15309 386 aa8.5□□□□□ -1.05
TRPM1-206ENST00000558212 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
TRPM1-206ENST00000558212 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
TRPM1-206ENST00000558212 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
TRPM1-206ENST00000558212 BHLHE41Q9C0J9 482 aaPredicted RBP8.5□□□□□ -1.05
TRPM1-206ENST00000558212 BRCA2P51587 3418 aa8.5□□□□□ -1.05
TRPM1-206ENST00000558212 RTL9Q8NET4 1388 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 ZNF609O15014 1411 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 ECE2O60344 883 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 BMP4P12644 408 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 MX2P20592 715 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 GSTT1P30711 240 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 ZNF76P36508 570 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 SREBF2Q12772 1141 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 TAF7Q15545 349 aaPredicted RBP8.49□□□□□ -1.05
TRPM1-206ENST00000558212 PCSK7Q16549 785 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 NCAPG2Q86XI2 1143 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 NSUN5Q96P11 429 aaKnown RBP8.49□□□□□ -1.05
TRPM1-206ENST00000558212 OSMRQ99650 979 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 EHD4Q9H223 541 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 DBNDD1Q9H9R9 158 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 PRR12Q9ULL5 1215 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 RRP7AQ9Y3A4 280 aaKnown RBP8.49□□□□□ -1.05
TRPM1-206ENST00000558212 ERBB4Q15303 1308 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 PITPNM2Q9BZ72 1349 aa8.49□□□□□ -1.05
TRPM1-206ENST00000558212 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 KDM3BQ7LBC6 1761 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 DLL1O00548 723 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 VIL1P09327 827 aaKnown RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 XRCC5P13010 732 aaKnown RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 MYL6BP14649 208 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 ITPKAP23677 461 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 ZNF280AP59817 542 aaPredicted RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 MEI1Q5TIA1 1274 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 ANGEL2Q5VTE6 544 aaKnown RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 FAM177A1Q8N128 213 aaPredicted RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 TMEM102Q8N9M5 508 aaPredicted RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 RNF34Q969K3 372 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 EYA3Q99504 573 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 LIN7BQ9HAP6 207 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 PPM1HQ9ULR3 514 aa8.48□□□□□ -1.05
TRPM1-206ENST00000558212 ASTN2O75129 1339 aaPredicted RBP8.48□□□□□ -1.05
TRPM1-206ENST00000558212 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 CDK11BP21127 795 aaKnown RBP8.47□□□□□ -1.05
TRPM1-206ENST00000558212 MAP2K3P46734 347 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 DCTN1Q14203 1278 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
TRPM1-206ENST00000558212 CC2D1BQ5T0F9 858 aaKnown RBP8.47□□□□□ -1.05
TRPM1-206ENST00000558212 AGBL3Q8NEM8 1001 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 TRIM17Q9Y577 477 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 SCN9AQ15858 1988 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 TAF1P21675 1872 aa8.47□□□□□ -1.05
TRPM1-206ENST00000558212 UBE2Q2LH0YL09 131 aa8.46□□□□□ -1.06
TRPM1-206ENST00000558212 HCLS1P14317 486 aaPredicted RBP8.46□□□□□ -1.06
TRPM1-206ENST00000558212 ADH6P28332 368 aa8.46□□□□□ -1.06
TRPM1-206ENST00000558212 GRIA4P48058 902 aa8.46□□□□□ -1.06
TRPM1-206ENST00000558212 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
TRPM1-206ENST00000558212 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.06
TRPM1-206ENST00000558212 MAP3K10Q02779 954 aa8.46□□□□□ -1.06
TRPM1-206ENST00000558212 HSP90AB3PQ58FF7 597 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms