RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 XPNPEP3Q9NQH7 507 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 FBXO40Q9UH90 709 aa16.18■□□□□ 0.18
SNRPA1-204ENST00000558020 SOX1O00570 391 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 ADCYAP1R1P41586 468 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 SLC4A3P48751 1232 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 OAZ1P54368 228 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 RRP1P56182 461 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 RTP1P59025 263 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 TFAP4Q01664 338 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 PPARAQ07869 468 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 LRRC41Q15345 812 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 TICAM2Q86XR7 235 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 CPXCR1Q8N123 301 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 CHURC1Q8WUH1 139 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 EVI5LQ96CN4 794 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 ATP11BQ9Y2G3 1177 aa16.17■□□□□ 0.18
SNRPA1-204ENST00000558020 BMP3P12645 472 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 AKR1A1P14550 325 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 AAMPQ13685 434 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 ANKRD35Q8N283 1001 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 SLC38A10Q9HBR0 1119 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 ISY1Q9ULR0 285 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 PARP14Q460N5 1801 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 FRMPD3Q5JV73 1810 aa16.16■□□□□ 0.18
SNRPA1-204ENST00000558020 COL11A1P12107 1806 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 IKQ13123 557 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 ZNF467Q7Z7K2 595 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 DEFB123Q8N688 67 aa16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 FERMT2Q96AC1 680 aa16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 FAM184BQ9ULE4 1060 aa16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 SYNGAP1Q96PV0 1343 aa16.15■□□□□ 0.18
SNRPA1-204ENST00000558020 GREB1LQ9C091 1923 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 TSPY2A6NKD2 308 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 SLC1A4P43007 532 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 STAT2P52630 851 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 FAM160B2Q86V87 743 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 LRRC47Q8N1G4 583 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 GMCL1Q96IK5 515 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 TSEN34Q9BSV6 310 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 RAVER2Q9HCJ3 691 aaKnown RBP16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 HELLSQ9NRZ9 838 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 PHF24Q9UPV7 400 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 RIPK3Q9Y572 518 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 LAMA3Q16787 3333 aa16.14■□□□□ 0.17
SNRPA1-204ENST00000558020 PLIN4Q96Q06 1357 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 DNAJC25-GNG10A0A024R161 153 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 TMEM232C9JQI7 657 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 ZNF865P0CJ78 1059 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 SNX17Q15036 470 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 NUP133Q8WUM0 1156 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 STAG1Q8WVM7 1258 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 SPC25Q9HBM1 224 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 TACC3Q9Y6A5 838 aa16.13■□□□□ 0.17
SNRPA1-204ENST00000558020 MYH4Q9Y623 1939 aa16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 PGK1P00558 417 aa16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 TAL1P17542 331 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 PDE1AP54750 535 aa16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 TRIM60Q495X7 471 aa16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 CRBNQ96SW2 442 aa16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 ABHD16BQ9H3Z7 469 aa16.12■□□□□ 0.17
SNRPA1-204ENST00000558020 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 PLA2G6O60733 806 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 DUSP11O75319 330 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 MCCP23508 829 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 ALX1Q15699 326 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 TKFCQ3LXA3 575 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 RCSD1Q6JBY9 416 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 SLC17A8Q8NDX2 589 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 RWDD1Q9H446 243 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 ANAPC4Q9UJX5 808 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 PLXNA1Q9UIW2 1896 aa16.11■□□□□ 0.17
SNRPA1-204ENST00000558020 MOXD2PA6NHM9 499 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 SNAI1O95863 264 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 TLE2Q04725 743 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 ACVR2BQ13705 512 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 MCMDC2Q4G0Z9 681 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 CCDC129Q6ZRS4 1044 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 PCSK9Q8NBP7 692 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 ACAD9Q9H845 621 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 HOMER2Q9NSB8 354 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 SALL3Q9BXA9 1300 aa16.1■□□□□ 0.17
SNRPA1-204ENST00000558020 A0A1W2PQ45 241 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 A0A1W2PQY0 241 aa16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 DCDC2CA8MYV0 355 aa16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
SNRPA1-204ENST00000558020 ORC4O43929 436 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms