RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CTGFP29279 349 aa29.85■■■□□ 2.37
SMAD6-202ENST00000557916 SLC16A2P36021 539 aa29.85■■■□□ 2.37
SMAD6-202ENST00000557916 FGD1P98174 961 aa29.85■■■□□ 2.37
SMAD6-202ENST00000557916 CAP1Q01518 475 aa29.85■■■□□ 2.37
SMAD6-202ENST00000557916 PLS1Q14651 629 aa29.85■■■□□ 2.37
SMAD6-202ENST00000557916 ASPRV1Q53RT3 343 aa29.85■■■□□ 2.37
SMAD6-202ENST00000557916 FMNL1O95466 1100 aaPredicted RBP29.84■■■□□ 2.37
SMAD6-202ENST00000557916 CCNA1P78396 465 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 TROAPQ12815 778 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 TMEM132BQ14DG7 1078 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 RUFY3Q7L099 469 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 ZNF654Q8IZM8 581 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 TRIM47Q96LD4 638 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 SPATC1LQ9H0A9 340 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 EFCC1Q9HA90 598 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 PRR12Q9ULL5 1215 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 CYP46A1Q9Y6A2 500 aa29.84■■■□□ 2.37
SMAD6-202ENST00000557916 A0A0G2JMZ2 1700 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 FDX1P10109 184 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 FCGRTP55899 365 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 SYDE2Q5VT97 1194 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 Q6ZUG5 572 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 SGMS1Q86VZ5 419 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 CCAR1Q8IX12 1150 aaKnown RBP29.83■■■□□ 2.37
SMAD6-202ENST00000557916 REPS2Q8NFH8 660 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 SLC38A10Q9HBR0 1119 aa29.83■■■□□ 2.37
SMAD6-202ENST00000557916 DDAH1O94760 285 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 GRM4Q14833 912 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 CTU1Q7Z7A3 348 aaKnown RBP29.82■■■□□ 2.36
SMAD6-202ENST00000557916 NUP133Q8WUM0 1156 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 MYL10Q9BUA6 226 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 PORCNQ9H237 461 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 TRIM17Q9Y577 477 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 SLC12A7Q9Y666 1083 aa29.82■■■□□ 2.36
SMAD6-202ENST00000557916 MOV10L1Q9BXT6 1211 aaKnown RBP29.81■■■□□ 2.36
SMAD6-202ENST00000557916 UPF3BQ9BZI7 483 aaKnown RBP29.81■■■□□ 2.36
SMAD6-202ENST00000557916 UBA5Q9GZZ9 404 aa29.81■■■□□ 2.36
SMAD6-202ENST00000557916 MAD2L2Q9UI95 211 aa29.81■■■□□ 2.36
SMAD6-202ENST00000557916 TNPO2O14787 897 aaKnown RBP29.8■■■□□ 2.36
SMAD6-202ENST00000557916 MAPK4P31152 587 aa29.8■■■□□ 2.36
SMAD6-202ENST00000557916 OTOP1Q7RTM1 612 aa29.8■■■□□ 2.36
SMAD6-202ENST00000557916 STAG2Q8N3U4 1231 aa29.8■■■□□ 2.36
SMAD6-202ENST00000557916 ZNF214Q9UL59 606 aaPredicted RBP29.8■■■□□ 2.36
SMAD6-202ENST00000557916 PALM3A6NDB9 673 aaPredicted RBP29.79■■■□□ 2.36
SMAD6-202ENST00000557916 GNRH1P01148 92 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 STAT3P40763 770 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 SYNE3Q6ZMZ3 975 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 CPXCR1Q8N123 301 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 IL17RAQ96F46 866 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 MAP3K14Q99558 947 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 CPVLQ9H3G5 476 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 KLRF2D3W0D1 207 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 ATP2A1O14983 1001 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 SNAP25P60880 206 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 FBXL16Q8N461 479 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 TEX13BQ9BXU2 312 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 UPF2Q9HAU5 1272 aaKnown RBP29.79■■■□□ 2.36
SMAD6-202ENST00000557916 CWC22Q9HCG8 908 aaKnown RBP29.79■■■□□ 2.36
SMAD6-202ENST00000557916 RAVER2Q9HCJ3 691 aaKnown RBP29.79■■■□□ 2.36
SMAD6-202ENST00000557916 ZSWIM8A7E2V4 1837 aa29.79■■■□□ 2.36
SMAD6-202ENST00000557916 CALM1P0DP23 149 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 CALM2P0DP24 149 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 CALM3P0DP25 149 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 HOXD10P28358 340 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 OAZ1P54368 228 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 WDR78Q5VTH9 848 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 RIOX2Q8IUF8 465 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 SHCBP1Q8NEM2 672 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 CTCFLQ8NI51 663 aaPredicted RBP29.78■■■□□ 2.36
SMAD6-202ENST00000557916 BRF1Q92994 677 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 COA7Q96BR5 231 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 C22orf23Q9BZE7 217 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 BRPF3Q9ULD4 1205 aa29.78■■■□□ 2.36
SMAD6-202ENST00000557916 SLC25A27O95847 323 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 ERCC3P19447 782 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 COL13A1Q5TAT6 717 aaPredicted RBP29.77■■■□□ 2.36
SMAD6-202ENST00000557916 SNRNP48Q6IEG0 339 aaKnown RBP29.77■■■□□ 2.36
SMAD6-202ENST00000557916 CCDC174Q6PII3 467 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 APOA5Q6Q788 366 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 NCAPG2Q86XI2 1143 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 RAB11FIP4Q86YS3 637 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 AGXT2Q9BYV1 514 aa29.77■■■□□ 2.36
SMAD6-202ENST00000557916 RANBP17Q9H2T7 1088 aaKnown RBP29.77■■■□□ 2.36
SMAD6-202ENST00000557916 COL11A1P12107 1806 aaPredicted RBP29.77■■■□□ 2.36
SMAD6-202ENST00000557916 KLF18A0A0U1RQI7 1052 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 RXRAP19793 462 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 KIF5BP33176 963 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 SLC4A3P48751 1232 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 GPR142Q7Z601 462 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 PLEKHH3Q7Z736 793 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 MICU3Q86XE3 530 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 ADGRF4Q8IZF3 695 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 PDRG1Q9NUG6 133 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 SRRDQ9UH36 339 aa29.76■■■□□ 2.35
SMAD6-202ENST00000557916 DHX16O60231 1041 aaKnown RBP29.75■■■□□ 2.35
SMAD6-202ENST00000557916 APOBRQ0VD83 1088 aa29.75■■■□□ 2.35
SMAD6-202ENST00000557916 CCDC144CPQ8IYA2 1237 aa29.75■■■□□ 2.35
SMAD6-202ENST00000557916 BACH2Q9BYV9 841 aa29.75■■■□□ 2.35
SMAD6-202ENST00000557916 MROH8Q9H579 483 aa29.75■■■□□ 2.35
SMAD6-202ENST00000557916 VAT1LQ9HCJ6 419 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms