RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	SNRNP48	Q6IEG0	339 aa	Known RBP	11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	DGKH	Q86XP1	1220 aa		11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	MMP19	Q99542	508 aa		11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	NUP88	Q99567	741 aa	Predicted RBP	11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	KAT14	Q9H8E8	782 aa		11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	FBXO28	Q9NVF7	368 aa		11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	ADAMTS5	Q9UNA0	930 aa		11.45	□□□□□ -0.58
RPS29-208	ENST00000557519	NEDD4	P46934	1319 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	POTEF	A5A3E0	1075 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	ATP2A1	O14983	1001 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	MSC	O60682	206 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	KDM4A	O75164	1064 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	HOXC6	P09630	235 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	MCC	P23508	829 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	ADORA2A	P29274	412 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	GJA8	P48165	433 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	MTFR1	Q15390	333 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	TKFC	Q3LXA3	575 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	GPATCH4	Q5T3I0	446 aa	Known RBP	11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	TBC1D10C	Q8IV04	446 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	USP6NL	Q92738	828 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	SLC38A10	Q9HBR0	1119 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	IL17RB	Q9NRM6	502 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	MTMR7	Q9Y216	660 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	CENPF	P49454	3210 aa		11.44	□□□□□ -0.58
RPS29-208	ENST00000557519	NMT2	O60551	498 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	PEX10	O60683	326 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	TFRC	P02786	760 aa	Known RBP	11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	PRKAR2A	P13861	404 aa	Known RBP	11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	NOV	P48745	357 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	RNF20	Q5VTR2	975 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	OLFML2B	Q68BL8	750 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	CHST13	Q8NET6	341 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	U2AF1L4	Q8WU68	220 aa	Known RBP	11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	TRIB2	Q92519	343 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	DDX11	Q96FC9	970 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	TMEM47	Q9BQJ4	181 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	UNC93B1	Q9H1C4	597 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	INCENP	Q9NQS7	918 aa		11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	PAK6	Q9NQU5	681 aa	Predicted RBP	11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	ZNF214	Q9UL59	606 aa	Predicted RBP	11.43	□□□□□ -0.58
RPS29-208	ENST00000557519	PDE4DIP	Q5VU43	2346 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519		B4E1Z4	1266 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	CDC45	O75419	566 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	SGPL1	O95470	568 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	EN2	P19622	333 aa	Predicted RBP	11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	SLC4A3	P48751	1232 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	IFIT1B	Q5T764	474 aa	Known RBP	11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	KCTD1	Q719H9	257 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	CPXCR1	Q8N123	301 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	ANKRD35	Q8N283	1001 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	ANKLE1	Q8NAG6	615 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	NCOA7	Q8NI08	942 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	DEFB118	Q96PH6	123 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	HTATIP2	Q9BUP3	242 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	NBPF3	Q9H094	633 aa		11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	DIS3	Q9Y2L1	958 aa	Known RBP	11.42	□□□□□ -0.58
RPS29-208	ENST00000557519	PFAS	O15067	1338 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	TNKS	O95271	1327 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	PLXNA1	Q9UIW2	1896 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	ASPRV1	Q53RT3	343 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	SYDE2	Q5VT97	1194 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	POTEE	Q6S8J3	1075 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	MSL3	Q8N5Y2	521 aa	Known RBP	11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	PNMA1	Q8ND90	353 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	REPS2	Q8NFH8	660 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	MAP4K1	Q92918	833 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	ESYT1	Q9BSJ8	1104 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	ACAD9	Q9H845	621 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	RAVER2	Q9HCJ3	691 aa	Known RBP	11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	ANO2	Q9NQ90	1003 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	PPP4R2	Q9NY27	417 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	NRBP1	Q9UHY1	535 aa		11.41	□□□□□ -0.58
RPS29-208	ENST00000557519	FARP2	O94887	1054 aa	Predicted RBP	11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	PDHB	P11177	359 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	CNGA1	P29973	690 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	CACNB2	Q08289	660 aa	Predicted RBP	11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	ZNF543	Q08ER8	600 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	MAP3K21	Q5TCX8	1036 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	BTNL9	Q6UXG8	535 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	ANKS1A	Q92625	1134 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	MPHOSPH6	Q99547	160 aa	Known RBP	11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	ZKSCAN3	Q9BRR0	538 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	ZSWIM5	Q9P217	1185 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	CCPG1	Q9ULG6	757 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	PRR12	Q9ULL5	1215 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	CNPY2	Q9Y2B0	182 aa		11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	RBM8A	Q9Y5S9	174 aa	Known RBP	11.4	□□□□□ -0.58
RPS29-208	ENST00000557519	ICAM1	P05362	532 aa		11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	CYP21A2	P08686	494 aa		11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	PARP1	P09874	1014 aa	Known RBP	11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	PTH1R	Q03431	593 aa		11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	TRAF1	Q13077	416 aa		11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	CCL14	Q16627	93 aa		11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	CCDC174	Q6PII3	467 aa		11.39	□□□□□ -0.59
RPS29-208	ENST00000557519	ENAH	Q8N8S7	591 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms