RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 CA3P07451 260 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 ATP2A2P16615 1042 aaKnown RBP12.66□□□□□ -0.38
TRAV33-201ENST00000557514 CYP7A1P22680 504 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 COPB2P35606 906 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 GJA9P57773 515 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 NKX3-2P78367 333 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 MAMDC4Q6UXC1 1216 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 SLC43A3Q8NBI5 491 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
TRAV33-201ENST00000557514 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
TRAV33-201ENST00000557514 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
TRAV33-201ENST00000557514 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
TRAV33-201ENST00000557514 CTAGE5O15320 804 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 TTC39AQ5SRH9 613 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 TMEM179Q6ZVK1 233 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
TRAV33-201ENST00000557514 BRWD1Q9NSI6 2320 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 DNAJC25-GNG10A0A024R161 153 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
TRAV33-201ENST00000557514 ARHGEF15O94989 841 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 ZAP70P43403 619 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 CCL23P55773 120 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
TRAV33-201ENST00000557514 CLEC10AQ8IUN9 316 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 SIAH1Q8IUQ4 282 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 VTI1AQ96AJ9 217 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 DBNDD2Q9BQY9 259 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 KCNH6Q9H252 994 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 FBXO28Q9NVF7 368 aa12.64□□□□□ -0.39
TRAV33-201ENST00000557514 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 ZBBXA8MT70 800 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 VWA5AO00534 786 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 PFKMP08237 780 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 STAT3P40763 770 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 TAP1Q03518 808 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 EVX2Q03828 476 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 ICA1Q05084 483 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 GNASQ5JWF2 1037 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 CCDC158Q5M9N0 1113 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 FBXL18Q96ME1 805 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
TRAV33-201ENST00000557514 SH2D4AQ9H788 454 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 CERS4Q9HA82 394 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 GPR108Q9NPR9 543 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 PPP1R9AQ9ULJ8 1098 aa12.63□□□□□ -0.39
TRAV33-201ENST00000557514 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 LPXNO60711 386 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
TRAV33-201ENST00000557514 GRB10Q13322 594 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 TTLL4Q14679 1199 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 CCDC144BQ3MJ40 725 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
TRAV33-201ENST00000557514 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
TRAV33-201ENST00000557514 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
TRAV33-201ENST00000557514 GJD3Q8N144 294 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 ARNTL2Q8WYA1 636 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 FGD4Q96M96 766 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.62□□□□□ -0.39
TRAV33-201ENST00000557514 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 SMCHD1A6NHR9 2005 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
TRAV33-201ENST00000557514 B4GALT4O60513 344 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 CABYRO75952 493 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 POLR3DP05423 398 aaPredicted RBP12.61□□□□□ -0.39
TRAV33-201ENST00000557514 GNAI3P08754 354 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 CXCL17Q6UXB2 119 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAV33-201ENST00000557514 FAM178BQ8IXR5 827 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 AGBL1Q96MI9 1066 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 SLC9A7Q96T83 725 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 TEX13BQ9BXU2 312 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
TRAV33-201ENST00000557514 KATNBL1Q9H079 304 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 ABHD16BQ9H3Z7 469 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 ASTN1O14525 1302 aa12.61□□□□□ -0.39
TRAV33-201ENST00000557514 E9PSI1 815 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 ALADP13716 330 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAV33-201ENST00000557514 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 SCLYQ96I15 445 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 UIMC1Q96RL1 719 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 TRPV6Q9H1D0 765 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 TRIOO75962 3097 aa12.6□□□□□ -0.39
TRAV33-201ENST00000557514 ZDBF2Q9HCK1 2354 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 AKR1B1P15121 316 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 BEX3Q00994 111 aa12.59□□□□□ -0.39
TRAV33-201ENST00000557514 ARMCX2Q7L311 632 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms