RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 TROAPQ12815 778 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 GRM4Q14833 912 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 TMEM132BQ14DG7 1078 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 BTNL9Q6UXG8 535 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 NFXL1Q6ZNB6 911 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 CHURC1Q8WUH1 139 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 IL17RAQ96F46 866 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 MYL10Q9BUA6 226 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 UPF3BQ9BZI7 483 aaKnown RBP17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 TM6SF1Q9BZW5 370 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 PRR12Q9ULL5 1215 aa17.36■□□□□ 0.37
VIPAS39-210ENST00000557466 DDAH1O94760 285 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 KIF22Q14807 665 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 SYDE2Q5VT97 1194 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 Q6ZUG5 572 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 RUFY3Q7L099 469 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 CATIPQ7Z7H3 387 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 SGMS1Q86VZ5 419 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 TMTC2Q8N394 836 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 STAG2Q8N3U4 1231 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 TRIM47Q96LD4 638 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 PORCNQ9H237 461 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 ZNF214Q9UL59 606 aaPredicted RBP17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 ZNF236Q9UL36 1845 aa17.35■□□□□ 0.37
VIPAS39-210ENST00000557466 PSMC4P43686 418 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 FCGRTP55899 365 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 SNAP25P60880 206 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 PLS1Q14651 629 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 RAB11FIP4Q86YS3 637 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 NUP133Q8WUM0 1156 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 MOV10L1Q9BXT6 1211 aaKnown RBP17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 SPATC1LQ9H0A9 340 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 SLC38A10Q9HBR0 1119 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 MAD2L2Q9UI95 211 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 BRPF3Q9ULD4 1205 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 CYP46A1Q9Y6A2 500 aa17.34■□□□□ 0.37
VIPAS39-210ENST00000557466 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.37
VIPAS39-210ENST00000557466 RBBP6Q7Z6E9 1792 aaKnown RBP17.33■□□□□ 0.37
VIPAS39-210ENST00000557466 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 ZBED4O75132 1171 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 RXRAP19793 462 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 CCNA1P78396 465 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 FGD1P98174 961 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 APOA5Q6Q788 366 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 OTOP1Q7RTM1 612 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 BRF1Q92994 677 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 AGXT2Q9BYV1 514 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 EFCC1Q9HA90 598 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 RAVER2Q9HCJ3 691 aaKnown RBP17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 TRIM17Q9Y577 477 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 SLC12A7Q9Y666 1083 aa17.33■□□□□ 0.36
VIPAS39-210ENST00000557466 TNPO2O14787 897 aaKnown RBP17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 FMNL1O95466 1100 aaPredicted RBP17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 FDX1P10109 184 aa17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 CTU1Q7Z7A3 348 aaKnown RBP17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 MICU3Q86XE3 530 aa17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 RIOX2Q8IUF8 465 aa17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 CPXCR1Q8N123 301 aa17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 FBXL16Q8N461 479 aa17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 C22orf23Q9BZE7 217 aa17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 CTDP1Q9Y5B0 961 aaPredicted RBP17.32■□□□□ 0.36
VIPAS39-210ENST00000557466 ZNFX1Q9P2E3 1918 aaKnown RBP17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 ZNF536O15090 1300 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 KLRF2D3W0D1 207 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 ATP2A1O14983 1001 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 MAPK4P31152 587 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 STAT3P40763 770 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 TOB2Q14106 344 aaPredicted RBP17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 SLC35G1Q2M3R5 365 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 CCDC174Q6PII3 467 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 TEX13BQ9BXU2 312 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
VIPAS39-210ENST00000557466 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 CALM1P0DP23 149 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 CALM2P0DP24 149 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 CALM3P0DP25 149 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 TAL1P17542 331 aaPredicted RBP17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 ERCC3P19447 782 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 RBM25P49756 843 aaKnown RBP17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 OAZ1P54368 228 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 ARHGEF6Q15052 776 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 WDR78Q5VTH9 848 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 GPR142Q7Z601 462 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 NBPF11Q86T75 865 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
VIPAS39-210ENST00000557466 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms