RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 LCORLQ8N3X6 602 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 REPS2Q8NFH8 660 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 CCDC17Q96LX7 622 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 GLT1D1Q96MS3 346 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 MYH8P13535 1937 aa14.72□□□□□ -0.05
RTN1-208ENST00000557422 SYNGAP1Q96PV0 1343 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 SMIM22K7EJ46 135 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 DUSP11O75319 330 aaKnown RBP14.71□□□□□ -0.05
RTN1-208ENST00000557422 IGFBP4P22692 258 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 CST5P28325 142 aaPredicted RBP14.71□□□□□ -0.05
RTN1-208ENST00000557422 CDK8P49336 464 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 MAMDC4Q6UXC1 1216 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 TMEM199Q8N511 208 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 MSRAQ9UJ68 235 aa14.71□□□□□ -0.05
RTN1-208ENST00000557422 DNAJC25-GNG10A0A024R161 153 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 PRKAB2O43741 272 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 ASGR1P07306 291 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 RAB30Q15771 203 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 FAM83BQ5T0W9 1011 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 ZKSCAN2Q63HK3 967 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 PSRC1Q6PGN9 363 aaPredicted RBP14.7□□□□□ -0.06
RTN1-208ENST00000557422 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
RTN1-208ENST00000557422 VTI1AQ96AJ9 217 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 FAM122AQ96E09 287 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 ARMT1Q9H993 441 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
RTN1-208ENST00000557422 ZHX1Q9UKY1 873 aaPredicted RBP14.7□□□□□ -0.06
RTN1-208ENST00000557422 CYP2D7A0A087X1C5 515 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 A0A0U1RQG5 324 aaPredicted RBP14.69□□□□□ -0.06
RTN1-208ENST00000557422 ARVCFO00192 962 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 ADCY6O43306 1168 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 C6orf222P0C671 652 aaPredicted RBP14.69□□□□□ -0.06
RTN1-208ENST00000557422 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 C12orf60Q5U649 245 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 ERC1Q8IUD2 1116 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 FAM126BQ8IXS8 530 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 IL27Q8NEV9 243 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 HERVK_113Q902F9 699 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 DDX11Q96FC9 970 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 PPP1R12CQ9BZL4 782 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 UPF3AQ9H1J1 476 aaKnown RBP14.69□□□□□ -0.06
RTN1-208ENST00000557422 NKX2-4Q9H2Z4 354 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 GOPCQ9HD26 462 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 IL23AQ9NPF7 189 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 ATP8A2Q9NTI2 1148 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 CXXC1Q9P0U4 656 aaPredicted RBP14.69□□□□□ -0.06
RTN1-208ENST00000557422 EXOC6BQ9Y2D4 811 aa14.69□□□□□ -0.06
RTN1-208ENST00000557422 USP17L12C9JPN9 530 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 USP17L21D6R901 530 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 GOLIM4O00461 696 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 CYP2C18P33260 490 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 GJA9P57773 515 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 C16orf86Q6ZW13 317 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
RTN1-208ENST00000557422 NECAB3Q96P71 396 aaPredicted RBP14.68□□□□□ -0.06
RTN1-208ENST00000557422 TEX13BQ9BXU2 312 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 YBX2Q9Y2T7 364 aaKnown RBP14.68□□□□□ -0.06
RTN1-208ENST00000557422 RIPK3Q9Y572 518 aa14.68□□□□□ -0.06
RTN1-208ENST00000557422 BAZ2AQ9UIF9 1905 aaKnown RBP14.68□□□□□ -0.06
RTN1-208ENST00000557422 APBB1O00213 710 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 TLR3O15455 904 aaKnown RBP14.67□□□□□ -0.06
RTN1-208ENST00000557422 RAD21O60216 631 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 MBD4O95243 580 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 CD4P01730 458 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 SLFNL1Q499Z3 407 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 GNASQ5JWF2 1037 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 SNRNP48Q6IEG0 339 aaKnown RBP14.67□□□□□ -0.06
RTN1-208ENST00000557422 CEP85Q6P2H3 762 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
RTN1-208ENST00000557422 NUP88Q99567 741 aaPredicted RBP14.67□□□□□ -0.06
RTN1-208ENST00000557422 SLF1Q9BQI6 1058 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 SLC28A3Q9HAS3 691 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 IL1RAPL2Q9NP60 686 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
RTN1-208ENST00000557422 TCF20Q9UGU0 1960 aaKnown RBP14.67□□□□□ -0.06
RTN1-208ENST00000557422 CHD7Q9P2D1 2997 aa14.67□□□□□ -0.06
RTN1-208ENST00000557422 CTAGE5O15320 804 aa14.66□□□□□ -0.06
RTN1-208ENST00000557422 FGBP02675 491 aa14.66□□□□□ -0.06
RTN1-208ENST00000557422 BMP1P13497 986 aa14.66□□□□□ -0.06
RTN1-208ENST00000557422 ITPRIPQ8IWB1 547 aa14.66□□□□□ -0.06
RTN1-208ENST00000557422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.66□□□□□ -0.06
RTN1-208ENST00000557422 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.66□□□□□ -0.06
RTN1-208ENST00000557422 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
RTN1-208ENST00000557422 MTIF3Q9H2K0 278 aaKnown RBP14.66□□□□□ -0.06
RTN1-208ENST00000557422 ABHD16BQ9H3Z7 469 aa14.66□□□□□ -0.06
RTN1-208ENST00000557422 MCM3APO60318 1980 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 GBF1Q92538 1859 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 ATP2A1O14983 1001 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 RLBP1P12271 317 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 ADD2P35612 726 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 SLC4A3P48751 1232 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 NKX3-2P78367 333 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.65□□□□□ -0.06
RTN1-208ENST00000557422 OTOP2Q7RTS6 562 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 AMOTL1Q8IY63 956 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 SLC43A3Q8NBI5 491 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms