RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 EHMT1Q9H9B1 1298 aa7.59□□□□□ -1.19
FOXN3-215ENST00000557261 TYW1Q9NV66 732 aaKnown RBP7.59□□□□□ -1.19
FOXN3-215ENST00000557261 RCAN3Q9UKA8 241 aa7.59□□□□□ -1.19
FOXN3-215ENST00000557261 ATP8A1Q9Y2Q0 1164 aa7.59□□□□□ -1.19
FOXN3-215ENST00000557261 N4BP2Q86UW6 1770 aaPredicted RBP7.59□□□□□ -1.2
FOXN3-215ENST00000557261 SCN11AQ9UI33 1791 aa7.59□□□□□ -1.2
FOXN3-215ENST00000557261 NRAPQ86VF7 1730 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 FAM86C2PA6NEL3 165 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 FAM157BP0CG42 384 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 MYCLP1P12525 358 aaPredicted RBP7.58□□□□□ -1.2
FOXN3-215ENST00000557261 CNGA1P29973 690 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 SOX18P35713 384 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 PLAURQ03405 335 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 TNP2Q05952 138 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 RPS26P11Q5JNZ5 115 aaPredicted RBP7.58□□□□□ -1.2
FOXN3-215ENST00000557261 DDX42Q86XP3 938 aaKnown RBP eCLIP7.58□□□□□ -1.2
FOXN3-215ENST00000557261 SULF2Q8IWU5 870 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 CBX8Q9HC52 389 aa7.58□□□□□ -1.2
FOXN3-215ENST00000557261 COL5A2P05997 1499 aaPredicted RBP7.57□□□□□ -1.2
FOXN3-215ENST00000557261 MRC1P22897 1456 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 LRP6O75581 1613 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 ADCY3O60266 1144 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 MAPTP10636 758 aaKnown RBP7.57□□□□□ -1.2
FOXN3-215ENST00000557261 CD33P20138 364 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 RIPK4P57078 832 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 TBX4P57082 545 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.57□□□□□ -1.2
FOXN3-215ENST00000557261 TM4SF20Q53R12 229 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 SULT6B1Q6IMI4 303 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 PSMD1Q99460 953 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 PBX4Q9BYU1 374 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 ZFYVE1Q9HBF4 777 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 BABAM1Q9NWV8 329 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 DYRK1BQ9Y463 629 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 CORINQ9Y5Q5 1042 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 SHANK3Q9BYB0 1731 aa7.57□□□□□ -1.2
FOXN3-215ENST00000557261 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.57□□□□□ -1.2
FOXN3-215ENST00000557261 SOS1Q07889 1333 aaPredicted RBP7.56□□□□□ -1.2
FOXN3-215ENST00000557261 LTBP3Q9NS15 1303 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 FANCIQ9NVI1 1328 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 A0A087X0B3 334 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 BNIP3LO60238 219 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 MAP3K6O95382 1288 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 HMOX1P09601 288 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 ACRP10323 421 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 NME2P22392 152 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 RXRBP28702 533 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 L1CAMP32004 1257 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 RRP1P56182 461 aaKnown RBP7.56□□□□□ -1.2
FOXN3-215ENST00000557261 GNAI1P63096 354 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 PCDH1Q08174 1060 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 LRRC41Q15345 812 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 LLGL2Q6P1M3 1020 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 PHACTR3Q96KR7 559 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 CEMIPQ8WUJ3 1361 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 KIAA0232Q92628 1395 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 MAP3K5Q99683 1374 aa7.56□□□□□ -1.2
FOXN3-215ENST00000557261 CRB1P82279 1406 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 LOC102724428A0A0B4J2F2 783 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 DNAJA2O60884 412 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 BPNT1O95861 308 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 ZNF853P0CG23 659 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 HOXD8P13378 290 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-215ENST00000557261 SIK1P57059 783 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 PTSQ03393 145 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 AMOTQ4VCS5 1084 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 NUTM2GQ5VZR2 741 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 VN1R5Q7Z5H4 357 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-215ENST00000557261 LRRC59Q96AG4 307 aaKnown RBP7.55□□□□□ -1.2
FOXN3-215ENST00000557261 ABHD17AQ96GS6 310 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 IGFLR1Q9H665 355 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 PCDHGC4Q9Y5F7 938 aa7.55□□□□□ -1.2
FOXN3-215ENST00000557261 PAPPAQ13219 1627 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 ATE1O95260 518 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 ARNTP27540 789 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 RPL6Q02878 288 aaKnown RBP7.54□□□□□ -1.2
FOXN3-215ENST00000557261 EFHC2Q5JST6 749 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 HGSNATQ68CP4 663 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 RIPOR1Q6ZS17 1223 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 NIM1KQ8IY84 436 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-215ENST00000557261 MFSD3Q96ES6 412 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 SPATA9Q9BWV2 254 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 ZC3H12CQ9C0D7 883 aaKnown RBP7.54□□□□□ -1.2
FOXN3-215ENST00000557261 CLEC4MQ9H2X3 399 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-215ENST00000557261 CYP8B1Q9UNU6 501 aa7.54□□□□□ -1.2
FOXN3-215ENST00000557261 RRP7AQ9Y3A4 280 aaKnown RBP7.54□□□□□ -1.2
FOXN3-215ENST00000557261 WDR17Q8IZU2 1322 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 B3GALT4O96024 378 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 IMPDH2P12268 514 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 GUCY2CP25092 1073 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 STAT3P40763 770 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 NRLP54845 237 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 PPP2R3AQ06190 1150 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 ZNF252P-AS1Q0IIN9 211 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 PABPC4Q13310 644 aaKnown RBP eCLIP7.53□□□□□ -1.2
FOXN3-215ENST00000557261 SLC10A6Q3KNW5 377 aa7.53□□□□□ -1.2
FOXN3-215ENST00000557261 ALDH1L2Q3SY69 923 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms